Variant report

Variant	rs12943735
Chromosome Location	chr17:63315108-63315109
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs11656254	1.00[ASN][1000 genomes]
rs17688887	1.00[ASN][1000 genomes]
rs28542898	1.00[ASN][1000 genomes]
rs2869581	1.00[ASN][1000 genomes]
rs2869583	1.00[ASN][1000 genomes]
rs34050956	1.00[AFR][1000 genomes]
rs34239840	1.00[AFR][1000 genomes]
rs35763069	1.00[AFR][1000 genomes]
rs55686226	1.00[ASN][1000 genomes]
rs55904132	1.00[ASN][1000 genomes]
rs59885956	1.00[ASN][1000 genomes]
rs62065135	1.00[ASN][1000 genomes]
rs71379928	1.00[AFR][1000 genomes]
rs7211964	1.00[ASN][1000 genomes]
rs73330465	1.00[ASN][1000 genomes]
rs73994748	1.00[ASN][1000 genomes]
rs9916373	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv482610	chr17:63214370-63372334	Enhancers Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:63315000-63315800	Weak transcription	Fetal Thymus	thymus

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links