Variant report

Variant rs1338184
Chromosome Location chr1:67005072-67005073
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:67000000-67005400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr1:67000200-67006400 Weak transcription H9 Cell Line embryonic stem cell
3 chr1:67000400-67005200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr1:67000400-67008000 Weak transcription Lung lung
5 chr1:67000400-67022000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr1:67000800-67029800 Weak transcription Primary hematopoietic stem cells blood
7 chr1:67001000-67006200 Weak transcription HepG2 liver
8 chr1:67001000-67008000 Weak transcription Left Ventricle heart
9 chr1:67001200-67022000 Weak transcription Right Ventricle heart
10 chr1:67001400-67005400 Weak transcription Fetal Lung lung
11 chr1:67001600-67011000 Weak transcription Stomach Smooth Muscle stomach
12 chr1:67001800-67006000 Weak transcription Cortex derived primary cultured neurospheres brain
13 chr1:67002000-67005600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr1:67002000-67010600 Weak transcription Pancreatic Islets Pancreatic Islet
15 chr1:67002200-67006400 Weak transcription Osteobl bone
16 chr1:67002600-67006000 Weak transcription HUVEC blood vessel
17 chr1:67002600-67006400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr1:67002800-67005200 Weak transcription NH-A brain
19 chr1:67002800-67008200 Weak transcription Duodenum Smooth Muscle Duodenum
20 chr1:67003000-67006200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr1:67003000-67012400 Enhancers Brain Hippocampus Middle brain
22 chr1:67003200-67005400 Weak transcription Fetal Brain Female brain
23 chr1:67003800-67008000 Enhancers Brain Anterior Caudate brain
24 chr1:67004200-67009200 Enhancers Brain Cingulate Gyrus brain
25 chr1:67004200-67009600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr1:67004200-67012200 Enhancers NHDF-Ad bronchial
27 chr1:67004200-67012400 Enhancers Fetal Heart heart
28 chr1:67004400-67005400 Enhancers NHLF lung
29 chr1:67004400-67006600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr1:67004800-67005400 Enhancers Muscle Satellite Cultured Cells --
31 chr1:67004800-67005600 Enhancers Aorta Aorta
32 chr1:67004800-67005600 Enhancers HMEC breast
33 chr1:67004800-67006000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr1:67004800-67006000 Weak transcription Fetal Brain Male brain
35 chr1:67004800-67006600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr1:67004800-67006800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr1:67004800-67006800 Enhancers NHEK skin
38 chr1:67004800-67012400 Enhancers Brain Substantia Nigra brain
39 chr1:67005000-67005400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr1:67005000-67005400 Flanking Active TSS Brain Angular Gyrus brain
41 chr1:67005000-67005600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr1:67005000-67005600 Transcr. at gene 5' and 3' IMR90 fetal lung fibroblasts Cell Line lung
43 chr1:67005000-67005600 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
44 chr1:67005000-67005600 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
45 chr1:67005000-67007000 Enhancers Breast Myoepithelial Primary Cells Breast
46 chr1:67005000-67007200 Enhancers ES-I3 Cell Line embryonic stem cell
47 chr1:67005000-67007200 Enhancers HUES64 Cell Line embryonic stem cell
48 chr1:67005000-67007400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
49 chr1:67005000-67008600 Enhancers Brain Inferior Temporal Lobe brain

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