Variant report

Variant	rs1482265
Chromosome Location	chr8:49575573-49575574
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs1384217	0.90[AFR][1000 genomes];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1384219	0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1564579	0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1871890	0.80[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs1905109	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2046235	0.94[ASN][1000 genomes]
rs28786183	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs4265212	0.87[AFR][1000 genomes];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6471945	0.84[EUR][1000 genomes]
rs6471950	0.90[AFR][1000 genomes];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6991516	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs7018074	0.83[ASN][1000 genomes]
rs7822883	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs970767	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:49567400-49575800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
2	chr8:49570000-49584000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr8:49572200-49577400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr8:49573400-49586000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr8:49574800-49576200	Enhancers	Brain Germinal Matrix	brain
6	chr8:49575200-49576400	Enhancers	Fetal Lung	lung

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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