Variant report

Variant	rs1564579
Chromosome Location	chr8:49571184-49571185
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs10089053	1.00[ASW][hapmap]
rs1384217	1.00[CHB][hapmap];0.91[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.96[TSI][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1384219	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1482265	0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1871890	1.00[CEU][hapmap];0.89[EUR][1000 genomes]
rs1905109	0.90[EUR][1000 genomes]
rs2046235	1.00[ASW][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[JPT][hapmap];0.85[MEX][hapmap];0.97[ASN][1000 genomes]
rs28786183	0.90[EUR][1000 genomes]
rs4265212	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6471945	0.92[TSI][hapmap];0.90[EUR][1000 genomes]
rs6471950	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6987398	0.84[CHD][hapmap];0.82[GIH][hapmap];0.81[JPT][hapmap];1.00[MEX][hapmap]
rs6991516	1.00[CEU][hapmap];0.93[EUR][1000 genomes]
rs7018074	0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7822883	1.00[CEU][hapmap];0.90[GIH][hapmap];1.00[MEX][hapmap];0.96[TSI][hapmap];0.96[EUR][1000 genomes]
rs970767	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:49563200-49572800	Weak transcription	Pancreas	Pancrea
2	chr8:49564400-49571200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
3	chr8:49567400-49575800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr8:49570000-49571200	Weak transcription	H9 Cell Line	embryonic stem cell
5	chr8:49570000-49572000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr8:49570000-49584000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr8:49570200-49575200	Weak transcription	Fetal Lung	lung
8	chr8:49571000-49571600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
9	chr8:49571000-49571800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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