Variant report

Variant	rs4265212
Chromosome Location	chr8:49584958-49584959
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs1384217	1.00[ASW][hapmap];1.00[CHB][hapmap];0.91[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.97[LWK][hapmap];1.00[MEX][hapmap];0.91[MKK][hapmap];0.96[TSI][hapmap];0.85[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1384219	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1482265	0.87[AFR][1000 genomes];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1564579	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1871890	1.00[CEU][hapmap];0.93[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1905109	0.96[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2046235	1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[JPT][hapmap];0.85[MEX][hapmap];0.97[ASN][1000 genomes]
rs28786183	1.00[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs6471945	0.92[TSI][hapmap];0.90[EUR][1000 genomes]
rs6471950	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6987398	0.84[CHD][hapmap];0.82[GIH][hapmap];0.81[JPT][hapmap];1.00[MEX][hapmap]
rs6991516	1.00[CEU][hapmap];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7018074	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7822883	0.93[ASW][hapmap];1.00[CEU][hapmap];0.90[GIH][hapmap];1.00[MEX][hapmap];0.96[TSI][hapmap];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs970767	0.92[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.83[MKK][hapmap];1.00[TSI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:44 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:49573400-49586000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr8:49580200-49586600	Enhancers	Fetal Lung	lung
3	chr8:49581200-49587800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
4	chr8:49582800-49587800	Enhancers	Lung	lung
5	chr8:49583400-49586000	Weak transcription	Fetal Intestine Small	intestine
6	chr8:49583600-49585400	Enhancers	Left Ventricle	heart
7	chr8:49583600-49585800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
8	chr8:49583600-49585800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
9	chr8:49583600-49586400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
10	chr8:49583600-49588200	Weak transcription	Small Intestine	intestine
11	chr8:49583600-49590000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
12	chr8:49583800-49585000	Weak transcription	Aorta	Aorta
13	chr8:49583800-49585200	Enhancers	Fetal Muscle Trunk	muscle
14	chr8:49583800-49585200	Enhancers	Gastric	stomach
15	chr8:49583800-49587200	Enhancers	Right Atrium	heart
16	chr8:49584000-49585200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
17	chr8:49584000-49585200	Enhancers	Skeletal Muscle Male	skeletal muscle
18	chr8:49584000-49586800	Enhancers	Pancreas	Pancrea
19	chr8:49584200-49585200	Enhancers	Placenta	Placenta
20	chr8:49584200-49586000	Weak transcription	Spleen	Spleen
21	chr8:49584200-49586200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
22	chr8:49584200-49586200	Weak transcription	Ovary	ovary
23	chr8:49584200-49586400	Enhancers	Monocytes-CD14+_RO01746	blood
24	chr8:49584200-49587200	Weak transcription	Fetal Muscle Leg	muscle
25	chr8:49584200-49587600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
26	chr8:49584200-49588000	Enhancers	Fetal Stomach	stomach
27	chr8:49584400-49585000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
28	chr8:49584400-49585200	Enhancers	Liver	Liver
29	chr8:49584400-49585800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
30	chr8:49584400-49586200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
31	chr8:49584400-49586600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
32	chr8:49584400-49586600	Weak transcription	HUES6 Cell Line	embryonic stem cell
33	chr8:49584400-49586600	Enhancers	Primary monocytes fromperipheralblood	blood
34	chr8:49584400-49586600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
35	chr8:49584400-49586800	Weak transcription	HUES48 Cell Line	embryonic stem cell
36	chr8:49584400-49587000	Weak transcription	HUES64 Cell Line	embryonic stem cell
37	chr8:49584400-49587000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
38	chr8:49584400-49587400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
39	chr8:49584400-49590000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
40	chr8:49584600-49586200	Weak transcription	Esophagus	oesophagus
41	chr8:49584600-49586600	Weak transcription	H1 Cell Line	embryonic stem cell
42	chr8:49584600-49587600	Weak transcription	Fetal Kidney	kidney
43	chr8:49584600-49589600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
44	chr8:49584800-49586400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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