Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:141030971..141033718-chr2:141035593..141037981,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10166355	1.00[CHB][hapmap]
rs1038851	1.00[MEX][hapmap]
rs10469592	1.00[MEX][hapmap];1.00[TSI][hapmap]
rs10496844	1.00[MEX][hapmap]
rs1486969	1.00[CHB][hapmap];0.95[CHD][hapmap]
rs16843673	0.91[ASN][1000 genomes]
rs16843705	1.00[CHB][hapmap];0.82[JPT][hapmap];0.94[ASN][1000 genomes]
rs16843706	1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs16843785	1.00[CEU][hapmap];1.00[CHB][hapmap];0.82[JPT][hapmap]
rs16843843	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs16843846	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs16844043	1.00[CEU][hapmap]
rs1968910	1.00[CHB][hapmap]
rs2046564	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap]
rs2931465	0.90[CHB][hapmap];0.85[CHD][hapmap]
rs610276	1.00[CHB][hapmap];0.95[CHD][hapmap];0.82[YRI][hapmap]
rs634627	1.00[MEX][hapmap];1.00[TSI][hapmap]
rs638444	0.90[YRI][hapmap]
rs657322	1.00[CHB][hapmap];0.82[YRI][hapmap]
rs670617	1.00[CHB][hapmap];0.89[CHD][hapmap]
rs6728269	0.90[YRI][hapmap]
rs7593072	0.90[CHB][hapmap]
rs7594736	0.90[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834392	chr2:140920900-141086613	Flanking Active TSS Weak transcription Enhancers Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases
2	nsv431757	chr2:140931289-141098020	Enhancers Flanking Active TSS Weak transcription Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
3	esv2754266	chr2:141023643-141270786	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:141032600-141033000	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
2	chr2:141032600-141033400	Enhancers	Breast Myoepithelial Primary Cells	Breast

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