Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10166355	1.00[CHB][hapmap]
rs1486969	1.00[CHB][hapmap];0.95[CHD][hapmap]
rs1492394	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs16843496	1.00[EUR][1000 genomes]
rs16843508	1.00[EUR][1000 genomes]
rs16843512	1.00[EUR][1000 genomes]
rs16843516	1.00[EUR][1000 genomes]
rs16843673	0.94[ASN][1000 genomes]
rs16843705	1.00[CHB][hapmap];0.82[JPT][hapmap];1.00[YRI][hapmap];0.97[ASN][1000 genomes]
rs16843706	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs16843785	1.00[CEU][hapmap];1.00[CHB][hapmap];0.82[JPT][hapmap]
rs16843843	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs16843846	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1968910	1.00[CHB][hapmap]
rs2931465	0.90[CHB][hapmap];0.85[CHD][hapmap]
rs59834968	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs610276	1.00[CHB][hapmap];0.95[CHD][hapmap]
rs657322	1.00[CHB][hapmap]
rs670617	1.00[CHB][hapmap];0.89[CHD][hapmap]
rs7593072	0.90[CHB][hapmap]
rs7594736	0.90[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834392	chr2:140920900-141086613	Flanking Active TSS Weak transcription Enhancers Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases
2	nsv431757	chr2:140931289-141098020	Enhancers Flanking Active TSS Weak transcription Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
3	esv2754491	chr2:140947477-141026986	Enhancers Weak transcription Active TSS Flanking Active TSS	TF binding region Chromatin interactive region lncRNA miRNA target site	3 gene(s)	inside rSNPs	n/a
4	esv2754266	chr2:141023643-141270786	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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