The 2.0 version of rSNPBase

Variant report

Variant rs1615806
Chromosome Location chr1:77634466-77634467
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:77595400-77640400 Weak transcription Primary T helper naive cells from peripheral blood blood
2 chr1:77606200-77651600 Weak transcription Aorta Aorta
3 chr1:77614400-77635600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr1:77614400-77635600 Weak transcription NHDF-Ad bronchial
5 chr1:77616200-77663200 Weak transcription Brain Hippocampus Middle brain
6 chr1:77617200-77636000 Weak transcription HSMM muscle
7 chr1:77618600-77634600 Weak transcription Right Ventricle heart
8 chr1:77619000-77638000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
9 chr1:77619000-77640200 Weak transcription A549 lung
10 chr1:77621000-77641600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr1:77623200-77639400 Weak transcription Fetal Lung lung
12 chr1:77623400-77641000 Weak transcription Rectal Smooth Muscle rectum
13 chr1:77625600-77634600 Weak transcription Pancreas Pancrea
14 chr1:77625600-77637800 Weak transcription iPS-18 Cell Line embryonic stem cell
15 chr1:77625800-77635200 Weak transcription Fetal Intestine Small intestine
16 chr1:77625800-77640000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
17 chr1:77626000-77635600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
18 chr1:77626000-77637800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr1:77626000-77639800 Weak transcription Brain Inferior Temporal Lobe brain
20 chr1:77626000-77640600 Weak transcription Brain Substantia Nigra brain
21 chr1:77626000-77662600 Weak transcription Thymus Thymus
22 chr1:77626000-77684200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
23 chr1:77626200-77634600 Weak transcription Fetal Thymus thymus
24 chr1:77626200-77637800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr1:77626200-77639400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr1:77626800-77639400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
27 chr1:77626800-77668000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
28 chr1:77626800-77674800 Weak transcription Ovary ovary
29 chr1:77626800-77676200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
30 chr1:77627200-77638600 Weak transcription Primary neutrophils fromperipheralblood blood
31 chr1:77627200-77641000 Weak transcription Duodenum Smooth Muscle Duodenum
32 chr1:77627800-77635600 Weak transcription Primary hematopoietic stem cells blood
33 chr1:77628000-77635800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
34 chr1:77628000-77636000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr1:77629000-77637800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr1:77629000-77642000 Weak transcription Primary T helper cells PMA-I stimulated --
37 chr1:77629200-77634600 Weak transcription Primary B cells from peripheral blood blood
38 chr1:77630200-77637200 Weak transcription HUES64 Cell Line embryonic stem cell
39 chr1:77630400-77639200 Weak transcription Dnd41 blood
40 chr1:77630400-77641200 Weak transcription NH-A brain
41 chr1:77630600-77638000 Weak transcription Primary hematopoietic stem cells short term culture blood
42 chr1:77630800-77638800 Weak transcription Monocytes-CD14+_RO01746 blood
43 chr1:77630800-77640200 Weak transcription Primary B cells from cord blood blood
44 chr1:77630800-77641200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
45 chr1:77630800-77652000 Weak transcription Rectal Mucosa Donor 29 rectum
46 chr1:77630800-77660600 Weak transcription Left Ventricle heart
47 chr1:77631000-77637800 Weak transcription Primary T cells from cord blood blood
48 chr1:77631800-77635000 Weak transcription Breast Myoepithelial Primary Cells Breast
49 chr1:77631800-77638000 Weak transcription Primary monocytes fromperipheralblood blood
50 chr1:77631800-77638000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015