The 2.0 version of rSNPBase

Variant report

Variant rs839822
Chromosome Location chr1:77662636-77662637
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:77616200-77663200 Weak transcription Brain Hippocampus Middle brain
2 chr1:77626000-77684200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr1:77626800-77668000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
4 chr1:77626800-77674800 Weak transcription Ovary ovary
5 chr1:77626800-77676200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
6 chr1:77643400-77669600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
7 chr1:77643600-77663000 Weak transcription Brain Inferior Temporal Lobe brain
8 chr1:77643600-77672600 Weak transcription Fetal Lung lung
9 chr1:77643800-77674400 Weak transcription Psoas Muscle Psoas
10 chr1:77648400-77684000 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr1:77649000-77679800 Weak transcription Primary T helper cells PMA-I stimulated --
12 chr1:77649200-77672400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr1:77649600-77666600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
14 chr1:77650800-77668800 Weak transcription Adipose Nuclei Adipose
15 chr1:77650800-77672000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr1:77650800-77684200 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr1:77651200-77663200 Weak transcription Duodenum Mucosa Duodenum
18 chr1:77651200-77668000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr1:77651800-77664800 Weak transcription Gastric stomach
20 chr1:77651800-77665800 Weak transcription Brain Cingulate Gyrus brain
21 chr1:77652600-77683400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
22 chr1:77653200-77670800 Weak transcription Breast Myoepithelial Primary Cells Breast
23 chr1:77653400-77667800 Weak transcription NHDF-Ad bronchial
24 chr1:77654000-77669600 Weak transcription Monocytes-CD14+_RO01746 blood
25 chr1:77655000-77673400 Weak transcription Primary T killer memory cells from peripheral blood blood
26 chr1:77655200-77673000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
27 chr1:77655200-77680400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
28 chr1:77655200-77684000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr1:77655400-77669000 Weak transcription Fetal Intestine Small intestine
30 chr1:77655600-77683200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
31 chr1:77655800-77670800 Weak transcription Dnd41 blood
32 chr1:77656400-77669800 Weak transcription Primary monocytes fromperipheralblood blood
33 chr1:77656600-77669600 Weak transcription Skeletal Muscle Female skeletal muscle
34 chr1:77657400-77680000 Weak transcription Primary T killer naive cells fromperipheralblood blood
35 chr1:77657400-77681200 Weak transcription Primary T helper naive cells fromperipheralblood blood
36 chr1:77658400-77669600 Weak transcription Primary T helper cells fromperipheralblood blood
37 chr1:77659200-77671000 Weak transcription Aorta Aorta
38 chr1:77659200-77683200 Weak transcription Brain Angular Gyrus brain
39 chr1:77660800-77669400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr1:77660800-77672200 Weak transcription Primary B cells from peripheral blood blood
41 chr1:77661000-77669600 Weak transcription Primary T cells fromperipheralblood blood
42 chr1:77661000-77669800 Weak transcription Primary hematopoietic stem cells blood
43 chr1:77661000-77671000 Weak transcription Primary hematopoietic stem cells short term culture blood
44 chr1:77661200-77663000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
45 chr1:77661200-77663600 Weak transcription Liver Liver
46 chr1:77661200-77669600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
47 chr1:77661200-77676400 Weak transcription Left Ventricle heart
48 chr1:77661400-77666600 Weak transcription Primary B cells from cord blood blood
49 chr1:77661800-77664200 Enhancers Primary T regulatory cells fromperipheralblood blood
50 chr1:77662000-77669400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015