The 2.0 version of rSNPBase

Variant report

Variant rs1253226
Chromosome Location chr1:77690858-77690859
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:77685600-77693400 Weak transcription Pancreas Pancrea
2 chr1:77685800-77692400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
3 chr1:77685800-77695600 Weak transcription Left Ventricle heart
4 chr1:77686000-77691600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
5 chr1:77686000-77692200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr1:77686000-77692400 Weak transcription Primary T helper naive cells fromperipheralblood blood
7 chr1:77686000-77694600 Weak transcription Brain Cingulate Gyrus brain
8 chr1:77686000-77694600 Weak transcription Fetal Kidney kidney
9 chr1:77686000-77699200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
10 chr1:77686600-77691200 Weak transcription Primary T regulatory cells fromperipheralblood blood
11 chr1:77686600-77693000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr1:77686600-77693200 Weak transcription Primary hematopoietic stem cells blood
13 chr1:77686600-77694600 Weak transcription A549 lung
14 chr1:77686600-77694800 Weak transcription Brain Hippocampus Middle brain
15 chr1:77686600-77698200 Weak transcription Brain Angular Gyrus brain
16 chr1:77686800-77693000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr1:77686800-77694600 Weak transcription Brain Anterior Caudate brain
18 chr1:77686800-77698000 Weak transcription HUVEC blood vessel
19 chr1:77687000-77695200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr1:77687000-77695200 Weak transcription NHDF-Ad bronchial
21 chr1:77687000-77695400 Weak transcription Muscle Satellite Cultured Cells --
22 chr1:77688200-77692400 Weak transcription Breast Myoepithelial Primary Cells Breast
23 chr1:77688200-77693000 Weak transcription iPS-20b Cell Line embryonic stem cell
24 chr1:77688400-77692000 Weak transcription Aorta Aorta
25 chr1:77688400-77692200 Weak transcription Fetal Muscle Leg muscle
26 chr1:77688400-77692800 Weak transcription HUES48 Cell Line embryonic stem cell
27 chr1:77688400-77693000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr1:77688400-77694200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr1:77688400-77697600 Weak transcription Primary T cells from cord blood blood
30 chr1:77688600-77692200 Weak transcription HUES64 Cell Line embryonic stem cell
31 chr1:77688800-77692600 Weak transcription iPS-18 Cell Line embryonic stem cell
32 chr1:77690200-77691000 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
33 chr1:77690800-77692800 Weak transcription Primary hematopoietic stem cells short term culture blood
34 chr1:77690800-77693000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr1:77690800-77695400 Weak transcription HSMM muscle

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Last update: Aug 31, 2015