The 2.0 version of rSNPBase

Variant report

Variant rs71658788
Chromosome Location chr1:77688409-77688410
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:77685400-77689600 Weak transcription Esophagus oesophagus
2 chr1:77685600-77693400 Weak transcription Pancreas Pancrea
3 chr1:77685800-77688600 Weak transcription Fetal Adrenal Gland Adrenal Gland
4 chr1:77685800-77688600 Weak transcription Fetal Thymus thymus
5 chr1:77685800-77688600 Weak transcription Psoas Muscle Psoas
6 chr1:77685800-77688800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr1:77685800-77689000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
8 chr1:77685800-77689600 Weak transcription Primary T cells fromperipheralblood blood
9 chr1:77685800-77689600 Weak transcription Ovary ovary
10 chr1:77685800-77690000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
11 chr1:77685800-77692400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
12 chr1:77685800-77695600 Weak transcription Left Ventricle heart
13 chr1:77686000-77688600 Weak transcription Fetal Brain Female brain
14 chr1:77686000-77688600 Weak transcription Right Ventricle heart
15 chr1:77686000-77689000 Weak transcription HSMM muscle
16 chr1:77686000-77689600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr1:77686000-77689600 Weak transcription Thymus Thymus
18 chr1:77686000-77690600 Weak transcription Primary B cells from cord blood blood
19 chr1:77686000-77690800 Weak transcription Fetal Brain Male brain
20 chr1:77686000-77691600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
21 chr1:77686000-77692200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr1:77686000-77692400 Weak transcription Primary T helper naive cells fromperipheralblood blood
23 chr1:77686000-77694600 Weak transcription Brain Cingulate Gyrus brain
24 chr1:77686000-77694600 Weak transcription Fetal Kidney kidney
25 chr1:77686000-77699200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
26 chr1:77686200-77688800 Weak transcription Brain Inferior Temporal Lobe brain
27 chr1:77686200-77689000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr1:77686200-77689600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
29 chr1:77686200-77690200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr1:77686600-77688600 Strong transcription Primary hematopoietic stem cells short term culture blood
31 chr1:77686600-77689800 Weak transcription Osteobl bone
32 chr1:77686600-77691200 Weak transcription Primary T regulatory cells fromperipheralblood blood
33 chr1:77686600-77693000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr1:77686600-77693200 Weak transcription Primary hematopoietic stem cells blood
35 chr1:77686600-77694600 Weak transcription A549 lung
36 chr1:77686600-77694800 Weak transcription Brain Hippocampus Middle brain
37 chr1:77686600-77698200 Weak transcription Brain Angular Gyrus brain
38 chr1:77686800-77689400 Weak transcription Primary T helper cells PMA-I stimulated --
39 chr1:77686800-77693000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
40 chr1:77686800-77694600 Weak transcription Brain Anterior Caudate brain
41 chr1:77686800-77698000 Weak transcription HUVEC blood vessel
42 chr1:77687000-77695200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr1:77687000-77695200 Weak transcription NHDF-Ad bronchial
44 chr1:77687000-77695400 Weak transcription Muscle Satellite Cultured Cells --
45 chr1:77687400-77689000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr1:77687600-77688600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr1:77687800-77688600 Enhancers H1 Cell Line embryonic stem cell
48 chr1:77687800-77688600 Genic enhancers HUES64 Cell Line embryonic stem cell
49 chr1:77687800-77688600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
50 chr1:77688000-77688600 Enhancers Fetal Intestine Large intestine

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Last update: Aug 31, 2015