The 2.0 version of rSNPBase

Variant report

Variant rs839818
Chromosome Location chr1:77668857-77668858
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:77626000-77684200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr1:77626800-77674800 Weak transcription Ovary ovary
3 chr1:77626800-77676200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr1:77643400-77669600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
5 chr1:77643600-77672600 Weak transcription Fetal Lung lung
6 chr1:77643800-77674400 Weak transcription Psoas Muscle Psoas
7 chr1:77648400-77684000 Weak transcription Duodenum Smooth Muscle Duodenum
8 chr1:77649000-77679800 Weak transcription Primary T helper cells PMA-I stimulated --
9 chr1:77649200-77672400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr1:77650800-77672000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr1:77650800-77684200 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr1:77652600-77683400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
13 chr1:77653200-77670800 Weak transcription Breast Myoepithelial Primary Cells Breast
14 chr1:77654000-77669600 Weak transcription Monocytes-CD14+_RO01746 blood
15 chr1:77655000-77673400 Weak transcription Primary T killer memory cells from peripheral blood blood
16 chr1:77655200-77673000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
17 chr1:77655200-77680400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
18 chr1:77655200-77684000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr1:77655400-77669000 Weak transcription Fetal Intestine Small intestine
20 chr1:77655600-77683200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
21 chr1:77655800-77670800 Weak transcription Dnd41 blood
22 chr1:77656400-77669800 Weak transcription Primary monocytes fromperipheralblood blood
23 chr1:77656600-77669600 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr1:77657400-77680000 Weak transcription Primary T killer naive cells fromperipheralblood blood
25 chr1:77657400-77681200 Weak transcription Primary T helper naive cells fromperipheralblood blood
26 chr1:77658400-77669600 Weak transcription Primary T helper cells fromperipheralblood blood
27 chr1:77659200-77671000 Weak transcription Aorta Aorta
28 chr1:77659200-77683200 Weak transcription Brain Angular Gyrus brain
29 chr1:77660800-77669400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr1:77660800-77672200 Weak transcription Primary B cells from peripheral blood blood
31 chr1:77661000-77669600 Weak transcription Primary T cells fromperipheralblood blood
32 chr1:77661000-77669800 Weak transcription Primary hematopoietic stem cells blood
33 chr1:77661000-77671000 Weak transcription Primary hematopoietic stem cells short term culture blood
34 chr1:77661200-77669600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr1:77661200-77676400 Weak transcription Left Ventricle heart
36 chr1:77662000-77669400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr1:77662000-77670800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr1:77662200-77671800 Weak transcription Primary T cells from cord blood blood
39 chr1:77664200-77669600 Weak transcription Primary T regulatory cells fromperipheralblood blood
40 chr1:77666000-77679800 Weak transcription Colon Smooth Muscle Colon
41 chr1:77666800-77683400 Weak transcription NHLF lung
42 chr1:77667800-77669200 Enhancers NHDF-Ad bronchial
43 chr1:77668000-77669000 Enhancers Osteobl bone
44 chr1:77668000-77669200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr1:77668600-77669000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr1:77668600-77669000 Enhancers Stomach Mucosa stomach
47 chr1:77668800-77669200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr1:77668800-77669200 Enhancers Adipose Nuclei Adipose
49 chr1:77668800-77673600 Weak transcription Fetal Thymus thymus

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Last update: Aug 31, 2015