The 2.0 version of rSNPBase

Variant report

Variant rs839814
Chromosome Location chr1:77670486-77670487
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:77626000-77684200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr1:77626800-77674800 Weak transcription Ovary ovary
3 chr1:77626800-77676200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr1:77643600-77672600 Weak transcription Fetal Lung lung
5 chr1:77643800-77674400 Weak transcription Psoas Muscle Psoas
6 chr1:77648400-77684000 Weak transcription Duodenum Smooth Muscle Duodenum
7 chr1:77649000-77679800 Weak transcription Primary T helper cells PMA-I stimulated --
8 chr1:77649200-77672400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr1:77650800-77672000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr1:77650800-77684200 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr1:77652600-77683400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
12 chr1:77653200-77670800 Weak transcription Breast Myoepithelial Primary Cells Breast
13 chr1:77655000-77673400 Weak transcription Primary T killer memory cells from peripheral blood blood
14 chr1:77655200-77673000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
15 chr1:77655200-77680400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
16 chr1:77655200-77684000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr1:77655600-77683200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
18 chr1:77655800-77670800 Weak transcription Dnd41 blood
19 chr1:77657400-77680000 Weak transcription Primary T killer naive cells fromperipheralblood blood
20 chr1:77657400-77681200 Weak transcription Primary T helper naive cells fromperipheralblood blood
21 chr1:77659200-77671000 Weak transcription Aorta Aorta
22 chr1:77659200-77683200 Weak transcription Brain Angular Gyrus brain
23 chr1:77660800-77672200 Weak transcription Primary B cells from peripheral blood blood
24 chr1:77661000-77671000 Weak transcription Primary hematopoietic stem cells short term culture blood
25 chr1:77661200-77676400 Weak transcription Left Ventricle heart
26 chr1:77662000-77670800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr1:77662200-77671800 Weak transcription Primary T cells from cord blood blood
28 chr1:77666000-77679800 Weak transcription Colon Smooth Muscle Colon
29 chr1:77666800-77683400 Weak transcription NHLF lung
30 chr1:77668800-77673600 Weak transcription Fetal Thymus thymus
31 chr1:77669200-77671600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr1:77669200-77672400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr1:77669200-77672800 Weak transcription Rectal Smooth Muscle rectum
34 chr1:77669400-77672000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr1:77669600-77671600 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
36 chr1:77670200-77671200 Weak transcription Primary T regulatory cells fromperipheralblood blood
37 chr1:77670200-77680600 Weak transcription Primary T helper cells fromperipheralblood blood
38 chr1:77670200-77683800 Weak transcription Primary T cells fromperipheralblood blood
39 chr1:77670200-77684000 Weak transcription Adipose Nuclei Adipose
40 chr1:77670400-77671000 Weak transcription Primary monocytes fromperipheralblood blood
41 chr1:77670400-77671000 Weak transcription Primary hematopoietic stem cells blood
42 chr1:77670400-77671800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
43 chr1:77670400-77671800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015