The 2.0 version of rSNPBase

Variant report

Variant rs1779198
Chromosome Location chr1:77635148-77635149
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:77595400-77640400 Weak transcription Primary T helper naive cells from peripheral blood blood
2 chr1:77606200-77651600 Weak transcription Aorta Aorta
3 chr1:77614400-77635600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr1:77614400-77635600 Weak transcription NHDF-Ad bronchial
5 chr1:77616200-77663200 Weak transcription Brain Hippocampus Middle brain
6 chr1:77617200-77636000 Weak transcription HSMM muscle
7 chr1:77619000-77638000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
8 chr1:77619000-77640200 Weak transcription A549 lung
9 chr1:77621000-77641600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr1:77623200-77639400 Weak transcription Fetal Lung lung
11 chr1:77623400-77641000 Weak transcription Rectal Smooth Muscle rectum
12 chr1:77625600-77637800 Weak transcription iPS-18 Cell Line embryonic stem cell
13 chr1:77625800-77635200 Weak transcription Fetal Intestine Small intestine
14 chr1:77625800-77640000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
15 chr1:77626000-77635600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
16 chr1:77626000-77637800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr1:77626000-77639800 Weak transcription Brain Inferior Temporal Lobe brain
18 chr1:77626000-77640600 Weak transcription Brain Substantia Nigra brain
19 chr1:77626000-77662600 Weak transcription Thymus Thymus
20 chr1:77626000-77684200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
21 chr1:77626200-77637800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr1:77626200-77639400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr1:77626800-77639400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr1:77626800-77668000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
25 chr1:77626800-77674800 Weak transcription Ovary ovary
26 chr1:77626800-77676200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
27 chr1:77627200-77638600 Weak transcription Primary neutrophils fromperipheralblood blood
28 chr1:77627200-77641000 Weak transcription Duodenum Smooth Muscle Duodenum
29 chr1:77627800-77635600 Weak transcription Primary hematopoietic stem cells blood
30 chr1:77628000-77635800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
31 chr1:77628000-77636000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr1:77629000-77637800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr1:77629000-77642000 Weak transcription Primary T helper cells PMA-I stimulated --
34 chr1:77630200-77637200 Weak transcription HUES64 Cell Line embryonic stem cell
35 chr1:77630400-77639200 Weak transcription Dnd41 blood
36 chr1:77630400-77641200 Weak transcription NH-A brain
37 chr1:77630600-77638000 Weak transcription Primary hematopoietic stem cells short term culture blood
38 chr1:77630800-77638800 Weak transcription Monocytes-CD14+_RO01746 blood
39 chr1:77630800-77640200 Weak transcription Primary B cells from cord blood blood
40 chr1:77630800-77641200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
41 chr1:77630800-77652000 Weak transcription Rectal Mucosa Donor 29 rectum
42 chr1:77630800-77660600 Weak transcription Left Ventricle heart
43 chr1:77631000-77637800 Weak transcription Primary T cells from cord blood blood
44 chr1:77631800-77638000 Weak transcription Primary monocytes fromperipheralblood blood
45 chr1:77631800-77638000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
46 chr1:77631800-77660600 Weak transcription Primary T cells fromperipheralblood blood
47 chr1:77632400-77636400 Weak transcription Primary T regulatory cells fromperipheralblood blood
48 chr1:77632800-77640800 Weak transcription Primary T helper cells fromperipheralblood blood
49 chr1:77633800-77635800 Weak transcription Fetal Brain Male brain
50 chr1:77634400-77635800 Weak transcription Muscle Satellite Cultured Cells --

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Last update: Aug 31, 2015