Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:142463363..142465171-chr2:142465686..142467955,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10177919	0.86[CHB][hapmap];1.00[CHD][hapmap]
rs10177925	0.86[CHB][hapmap]
rs1347659	0.87[ASW][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs1370330	0.86[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs164978	0.86[CHB][hapmap]
rs164979	0.86[CHB][hapmap];0.92[CHD][hapmap]
rs16846700	0.86[CHB][hapmap]
rs16846817	0.86[CHB][hapmap]
rs16846884	0.85[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs16846922	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs16846925	0.87[LWK][hapmap];0.86[MKK][hapmap];0.92[AFR][1000 genomes]
rs16846935	1.00[CHB][hapmap];1.00[CHD][hapmap];0.81[GIH][hapmap];1.00[JPT][hapmap];0.89[MKK][hapmap];0.85[TSI][hapmap];0.82[YRI][hapmap];0.88[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs16846937	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs16846962	0.86[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs16846974	0.86[CHB][hapmap];1.00[JPT][hapmap]
rs354853	0.86[CHB][hapmap]
rs354856	1.00[CHB][hapmap]
rs355558	0.83[ASN][1000 genomes]
rs355559	0.83[ASN][1000 genomes]
rs41320547	1.00[CHB][hapmap];1.00[CHD][hapmap];0.83[GIH][hapmap];1.00[JPT][hapmap]
rs58328208	0.81[ASN][1000 genomes]
rs6736591	0.86[CHB][hapmap]
rs7560183	0.88[CHB][hapmap]
rs7560557	0.86[CHB][hapmap];0.92[CHD][hapmap]
rs978600	0.88[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834394	chr2:142430225-142593264	Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:142462400-142469400	Weak transcription	Fetal Lung	lung
2	chr2:142464000-142467400	Weak transcription	Liver	Liver

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