Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10177919	0.85[CHB][hapmap]
rs10177925	0.85[CHB][hapmap]
rs1347659	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1370330	0.85[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.90[AFR][1000 genomes];0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs164978	0.85[CHB][hapmap]
rs164979	0.85[CHB][hapmap]
rs16846700	0.85[CHB][hapmap]
rs16846817	0.85[CHB][hapmap]
rs16846884	0.82[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.90[AFR][1000 genomes];0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs16846918	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs16846922	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16846935	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs16846962	1.00[CEU][hapmap];0.85[CHB][hapmap];1.00[JPT][hapmap];0.80[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs16846974	1.00[CEU][hapmap];0.85[CHB][hapmap];1.00[JPT][hapmap]
rs354853	0.85[CHB][hapmap]
rs354856	1.00[CHB][hapmap]
rs355558	0.83[ASN][1000 genomes]
rs355559	0.83[ASN][1000 genomes]
rs41320547	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs58328208	0.81[ASN][1000 genomes]
rs6736591	0.85[CHB][hapmap]
rs7560183	0.86[CHB][hapmap]
rs7560557	0.85[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834394	chr2:142430225-142593264	Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv433206	chr2:142469781-142486875	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:142469600-142471400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr2:142469600-142471600	Weak transcription	Adipose Nuclei	Adipose
3	chr2:142469600-142472000	Weak transcription	Liver	Liver
4	chr2:142469800-142472400	Weak transcription	Fetal Lung	lung

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