Variant report

Variant rs16881296
Chromosome Location chr6:72122355-72122356
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:72106000-72124800 Weak transcription Fetal Muscle Leg muscle
2 chr6:72106400-72126800 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr6:72106400-72128600 Weak transcription Fetal Brain Male brain
4 chr6:72106800-72128600 Weak transcription Fetal Brain Female brain
5 chr6:72106800-72128800 Weak transcription Brain Germinal Matrix brain
6 chr6:72107800-72125000 Weak transcription Fetal Muscle Trunk muscle
7 chr6:72114000-72124800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr6:72114200-72125000 Weak transcription Brain Angular Gyrus brain
9 chr6:72115400-72125200 Weak transcription Fetal Intestine Large intestine
10 chr6:72115600-72123000 Genic enhancers Muscle Satellite Cultured Cells --
11 chr6:72116200-72128600 Weak transcription Placenta Amnion Placenta Amnion
12 chr6:72117200-72122400 Weak transcription Brain Inferior Temporal Lobe brain
13 chr6:72117600-72128000 Weak transcription iPS-20b Cell Line embryonic stem cell
14 chr6:72118200-72122400 Weak transcription ES-WA7 Cell Line embryonic stem cell
15 chr6:72118200-72122800 Genic enhancers HMEC breast
16 chr6:72118200-72127800 Weak transcription HUES64 Cell Line embryonic stem cell
17 chr6:72118400-72123200 Genic enhancers HUVEC blood vessel
18 chr6:72118600-72122600 Genic enhancers NH-A brain
19 chr6:72118600-72122600 Genic enhancers NHDF-Ad bronchial
20 chr6:72118600-72122800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr6:72118600-72122800 Enhancers Brain Anterior Caudate brain
22 chr6:72118800-72122400 Weak transcription Brain Hippocampus Middle brain
23 chr6:72119000-72125000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
24 chr6:72119400-72122600 Enhancers Psoas Muscle Psoas
25 chr6:72119800-72125200 Weak transcription Fetal Adrenal Gland Adrenal Gland
26 chr6:72120000-72122600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr6:72120000-72129000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr6:72120200-72126600 Weak transcription Fetal Intestine Small intestine
29 chr6:72120200-72126600 Weak transcription Lung lung
30 chr6:72120400-72122600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
31 chr6:72120400-72123400 ZNF genes & repeats NHEK skin
32 chr6:72120800-72122800 Enhancers NHLF lung
33 chr6:72121000-72124200 Genic enhancers H9 Derived Neuron Cultured Cells ES cell derived
34 chr6:72121200-72122600 Enhancers Aorta Aorta
35 chr6:72121400-72122400 Enhancers Liver Liver
36 chr6:72121400-72124800 Enhancers Osteobl bone
37 chr6:72121600-72122400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr6:72121600-72123000 Enhancers Colon Smooth Muscle Colon
39 chr6:72121600-72123000 Enhancers Fetal Lung lung
40 chr6:72121600-72123600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr6:72121800-72122400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
42 chr6:72121800-72122400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr6:72121800-72122400 Genic enhancers Adipose Nuclei Adipose
44 chr6:72121800-72122400 Flanking Active TSS Duodenum Smooth Muscle Duodenum
45 chr6:72121800-72122400 Enhancers Placenta Placenta
46 chr6:72121800-72122600 Enhancers H1 Cell Line embryonic stem cell
47 chr6:72121800-72122600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
48 chr6:72121800-72122600 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
49 chr6:72121800-72122600 Enhancers Fetal Heart heart
50 chr6:72121800-72122600 Enhancers Gastric stomach

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