Variant report

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-C11orf75-2	chr11:93342926-93343499	NONHSAT023652

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10831074	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11020422	0.92[ASN][1000 genomes]
rs11020443	0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11020444	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11020447	1.00[CHB][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs16919088	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs17564202	0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1939563	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1962041	1.00[CEU][hapmap]
rs1986399	0.85[CEU][hapmap]
rs2155244	0.86[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3949089	0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs41357749	1.00[CEU][hapmap]
rs4478954	1.00[CEU][hapmap];1.00[CHB][hapmap];0.86[JPT][hapmap];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs57226582	0.86[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs61918529	0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7108777	0.97[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7118456	0.85[EUR][1000 genomes]
rs7128771	0.95[EUR][1000 genomes]
rs7928672	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7932373	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7936273	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv898181	chr11:93072843-93662459	Flanking Active TSS Weak transcription Enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	119 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:93342600-93344200	Weak transcription	Primary monocytes fromperipheralblood	blood
2	chr11:93342600-93344400	Weak transcription	Monocytes-CD14+_RO01746	blood
3	chr11:93342800-93346800	Enhancers	Fetal Intestine Large	intestine
4	chr11:93343000-93343600	Enhancers	Fetal Intestine Small	intestine
5	chr11:93343200-93344600	Enhancers	Sigmoid Colon	Sigmoid Colon
6	chr11:93343200-93344800	Enhancers	Duodenum Mucosa	Duodenum
7	chr11:93343200-93344800	Enhancers	Gastric	stomach
8	chr11:93343200-93345400	Enhancers	Pancreas	Pancrea
9	chr11:93343200-93346600	Enhancers	Rectal Mucosa Donor 31	rectum
10	chr11:93343200-93346600	Enhancers	Stomach Mucosa	stomach

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