Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs12259759	1.00[EUR][1000 genomes]
rs12261630	1.00[EUR][1000 genomes]
rs16916143	1.00[EUR][1000 genomes]
rs16922558	1.00[EUR][1000 genomes]
rs16922745	1.00[EUR][1000 genomes]
rs16922788	1.00[EUR][1000 genomes]
rs2364867	1.00[EUR][1000 genomes]
rs60375820	0.84[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs6482230	1.00[EUR][1000 genomes]
rs6482243	1.00[EUR][1000 genomes]
rs67005858	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs7071781	0.86[AMR][1000 genomes]
rs7072301	1.00[EUR][1000 genomes]
rs7081969	1.00[EUR][1000 genomes]
rs7092039	1.00[EUR][1000 genomes]
rs72816866	1.00[EUR][1000 genomes]
rs73600514	1.00[EUR][1000 genomes]
rs7895792	1.00[EUR][1000 genomes]
rs7899359	1.00[EUR][1000 genomes]
rs7919135	1.00[EUR][1000 genomes]
rs7922160	0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831809	chr10:22918101-23069676	Weak transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv550210	chr10:23012096-23064702	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	nsv550211	chr10:23020350-23079385	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:23020000-23029800	Weak transcription	Stomach Mucosa	stomach
2	chr10:23026200-23028200	Enhancers	Monocytes-CD14+_RO01746	blood
3	chr10:23026600-23028200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr10:23026600-23028200	Enhancers	Hela-S3	cervix
5	chr10:23026600-23028200	Enhancers	HUVEC	blood vessel
6	chr10:23026600-23028200	Enhancers	NHDF-Ad	bronchial
7	chr10:23026600-23028600	Enhancers	Primary monocytes fromperipheralblood	blood
8	chr10:23027000-23028400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr10:23027600-23028200	Enhancers	Muscle Satellite Cultured Cells	--
10	chr10:23027600-23028200	Enhancers	Osteobl	bone
11	chr10:23028000-23031400	Weak transcription	Adipose Nuclei	Adipose

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