The 2.0 version of rSNPBase

Variant report

Variant rs16922558
Chromosome Location chr10:22941443-22941444
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:22915000-22951800 Weak transcription Fetal Intestine Small intestine
2 chr10:22927800-22942800 Enhancers Brain Anterior Caudate brain
3 chr10:22929600-22948400 Enhancers Brain Cingulate Gyrus brain
4 chr10:22932400-22944200 Weak transcription Brain Germinal Matrix brain
5 chr10:22933600-22944200 Weak transcription Fetal Stomach stomach
6 chr10:22934800-22942400 Enhancers Fetal Adrenal Gland Adrenal Gland
7 chr10:22935000-22945400 Enhancers Primary B cells from peripheral blood blood
8 chr10:22935200-22953000 Enhancers Brain Substantia Nigra brain
9 chr10:22936400-22958000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr10:22936600-22942000 Enhancers Primary neutrophils fromperipheralblood blood
11 chr10:22936600-22943800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
12 chr10:22936800-22941800 Weak transcription Esophagus oesophagus
13 chr10:22936800-22944600 Weak transcription Gastric stomach
14 chr10:22936800-22944800 Enhancers Primary B cells from cord blood blood
15 chr10:22937000-22941800 Weak transcription Aorta Aorta
16 chr10:22937000-22944800 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr10:22937400-22943200 Weak transcription ES-WA7 Cell Line embryonic stem cell
18 chr10:22937600-22944200 Weak transcription NHLF lung
19 chr10:22937800-22944400 Weak transcription ES-I3 Cell Line embryonic stem cell
20 chr10:22937800-22947800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
21 chr10:22937800-22951200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
22 chr10:22937800-22955200 Weak transcription Rectal Mucosa Donor 29 rectum
23 chr10:22938000-22944600 Weak transcription Fetal Heart heart
24 chr10:22938200-22947800 Weak transcription NH-A brain
25 chr10:22938400-22942000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
26 chr10:22938400-22942800 Enhancers Spleen Spleen
27 chr10:22938400-22943200 Weak transcription Fetal Kidney kidney
28 chr10:22938600-22941800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
29 chr10:22938600-22943600 Weak transcription iPS-15b Cell Line embryonic stem cell
30 chr10:22938600-22944200 Weak transcription HUES64 Cell Line embryonic stem cell
31 chr10:22938600-22944200 Weak transcription iPS-18 Cell Line embryonic stem cell
32 chr10:22938600-22944200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr10:22938600-22944200 Weak transcription Stomach Mucosa stomach
34 chr10:22938600-22944400 Weak transcription iPS-20b Cell Line embryonic stem cell
35 chr10:22938600-22944400 Weak transcription Osteobl bone
36 chr10:22938800-22941600 Genic enhancers Primary T cells fromperipheralblood blood
37 chr10:22938800-22941600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
38 chr10:22938800-22941600 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
39 chr10:22938800-22941600 Enhancers Primary T killer naive cells fromperipheralblood blood
40 chr10:22938800-22942000 Genic enhancers Brain Hippocampus Middle brain
41 chr10:22938800-22942200 Enhancers Primary hematopoietic stem cells short term culture blood
42 chr10:22938800-22942200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr10:22938800-22943400 Weak transcription H1 Cell Line embryonic stem cell
44 chr10:22938800-22943400 Weak transcription HUES48 Cell Line embryonic stem cell
45 chr10:22938800-22943600 Weak transcription Fetal Lung lung
46 chr10:22938800-22944200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr10:22938800-22944600 Weak transcription Colonic Mucosa Colon
48 chr10:22938800-22946800 Enhancers Primary hematopoietic stem cells blood
49 chr10:22938800-22949400 Weak transcription HMEC breast
50 chr10:22938800-22949600 Weak transcription NHEK skin

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Last update: Aug 31, 2015