The 2.0 version of rSNPBase

Variant report

Variant rs73598599
Chromosome Location chr10:23000192-23000193
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:22972600-23000200 Enhancers Primary T killer naive cells fromperipheralblood blood
2 chr10:22975600-23001200 Weak transcription Colonic Mucosa Colon
3 chr10:22980400-23000800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr10:22983200-23000400 Weak transcription Muscle Satellite Cultured Cells --
5 chr10:22983200-23001200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
6 chr10:22983200-23001400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr10:22987200-23001600 Weak transcription Fetal Muscle Trunk muscle
8 chr10:22987200-23001600 Weak transcription Ovary ovary
9 chr10:22987800-23000400 Enhancers Primary T helper naive cells fromperipheralblood blood
10 chr10:22988600-23001600 Weak transcription Fetal Intestine Small intestine
11 chr10:22989600-23001800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr10:22989600-23001800 Weak transcription Pancreas Pancrea
13 chr10:22990600-23000400 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr10:22990600-23001800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr10:22990800-23001000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr10:22990800-23001000 Weak transcription HUVEC blood vessel
17 chr10:22990800-23001400 Weak transcription ES-I3 Cell Line embryonic stem cell
18 chr10:22990800-23001600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
19 chr10:22990800-23001600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
20 chr10:22991200-23001600 Weak transcription H9 Cell Line embryonic stem cell
21 chr10:22992000-23000400 Weak transcription Fetal Stomach stomach
22 chr10:22992200-23000200 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr10:22992200-23001800 Weak transcription Gastric stomach
24 chr10:22994800-23000600 Weak transcription HUES6 Cell Line embryonic stem cell
25 chr10:22997200-23001200 Enhancers Primary B cells from peripheral blood blood
26 chr10:22997400-23003800 Active TSS Brain Inferior Temporal Lobe brain
27 chr10:22997800-23000800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
28 chr10:22997800-23001600 Weak transcription Right Ventricle heart
29 chr10:22998000-23001800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
30 chr10:22998600-23000800 Enhancers Primary hematopoietic stem cells blood
31 chr10:22998600-23003800 Active TSS Brain Hippocampus Middle brain
32 chr10:22998800-23000800 Enhancers Primary mononuclear cells fromperipheralblood Blood
33 chr10:22999000-23000200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr10:22999000-23000200 Enhancers Primary hematopoietic stem cells short term culture blood
35 chr10:22999000-23000200 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
36 chr10:22999000-23000400 Enhancers Primary B cells from cord blood blood
37 chr10:22999000-23000400 Enhancers Aorta Aorta
38 chr10:22999000-23000400 Flanking Active TSS GM12878-XiMat blood
39 chr10:22999000-23000600 Enhancers Small Intestine intestine
40 chr10:22999000-23000600 Enhancers Thymus Thymus
41 chr10:22999000-23001000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr10:22999000-23001200 Enhancers Fetal Adrenal Gland Adrenal Gland
43 chr10:22999000-23001600 Enhancers Primary monocytes fromperipheralblood blood
44 chr10:22999000-23001600 Enhancers Colon Smooth Muscle Colon
45 chr10:22999000-23002200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr10:22999000-23003800 Active TSS Brain Substantia Nigra brain
47 chr10:22999200-23000200 Enhancers HUES48 Cell Line embryonic stem cell
48 chr10:22999200-23000400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr10:22999200-23000600 Flanking Active TSS Primary T helper cells PMA-I stimulated --
50 chr10:22999200-23000600 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood

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Last update: Aug 31, 2015