Variant report

Variant	rs16932570
Chromosome Location	chr11:16131703-16131704
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:16130157..16133054-chr11:16135453..16138445,2	K562	blood:

Extended variants
information (count: 65 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:63)

rs_ID	r²[population]
rs10500821	1.00[CEU][hapmap]
rs10500822	1.00[CEU][hapmap]
rs10500823	1.00[CEU][hapmap]
rs10500824	1.00[CEU][hapmap]
rs10500825	1.00[CEU][hapmap]
rs10500826	1.00[CEU][hapmap]
rs10500827	1.00[CEU][hapmap]
rs11023803	1.00[CEU][hapmap]
rs12574859	1.00[CEU][hapmap]
rs12574862	1.00[CEU][hapmap]
rs12575408	1.00[CEU][hapmap]
rs12575412	1.00[CEU][hapmap]
rs12575614	1.00[CEU][hapmap]
rs12575858	1.00[CEU][hapmap]
rs12576205	1.00[CEU][hapmap]
rs12576286	1.00[CEU][hapmap]
rs12576586	1.00[CEU][hapmap]
rs12577378	1.00[CEU][hapmap]
rs12577528	1.00[CEU][hapmap]
rs1349982	1.00[AFR][1000 genomes]
rs1455101	1.00[CEU][hapmap]
rs1598296	1.00[CEU][hapmap]
rs16924862	1.00[CEU][hapmap]
rs16932405	1.00[CEU][hapmap]
rs16932409	1.00[CEU][hapmap]
rs16932414	1.00[CEU][hapmap]
rs16932416	1.00[CEU][hapmap]
rs16932445	1.00[CEU][hapmap]
rs16932450	1.00[CEU][hapmap]
rs16932453	1.00[CEU][hapmap]
rs16932455	1.00[CEU][hapmap]
rs16932458	1.00[CEU][hapmap]
rs16932469	1.00[CEU][hapmap]
rs16932573	1.00[CEU][hapmap]
rs16932580	1.00[CEU][hapmap]
rs16932585	1.00[CEU][hapmap]
rs16932620	1.00[CEU][hapmap]
rs16932622	1.00[CEU][hapmap]
rs16932630	1.00[CEU][hapmap]
rs16932650	1.00[CEU][hapmap]
rs16932653	1.00[CEU][hapmap]
rs16932655	1.00[CEU][hapmap]
rs16932664	1.00[CEU][hapmap]
rs16932670	1.00[CEU][hapmap]
rs16932711	1.00[CEU][hapmap]
rs16932719	1.00[CEU][hapmap]
rs1840422	1.00[CEU][hapmap]
rs4254041	1.00[CEU][hapmap]
rs4279976	1.00[CEU][hapmap]
rs4466793	1.00[CEU][hapmap]
rs4478958	1.00[CEU][hapmap]
rs4486592	1.00[CEU][hapmap]
rs7107697	1.00[CEU][hapmap]
rs7110987	1.00[CEU][hapmap]
rs7126432	1.00[CEU][hapmap]
rs7924380	1.00[CEU][hapmap]
rs7936647	1.00[CEU][hapmap]
rs7938840	1.00[CEU][hapmap]
rs7942659	1.00[CEU][hapmap]
rs7947622	1.00[CEU][hapmap]
rs7947979	1.00[CEU][hapmap]
rs993698	1.00[CEU][hapmap]
rs996184	1.00[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv553562	chr11:16112180-16220289	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	nsv529731	chr11:16122782-16468170	Enhancers Active TSS Bivalent Enhancer Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:16098600-16137000	Weak transcription	Pancreas	Pancrea
2	chr11:16121600-16135400	Weak transcription	Fetal Intestine Large	intestine
3	chr11:16121800-16136800	Weak transcription	Small Intestine	intestine
4	chr11:16122400-16132400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr11:16127400-16133200	Weak transcription	Skeletal Muscle Female	skeletal muscle
6	chr11:16127400-16136000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr11:16128200-16132400	Weak transcription	Cortex derived primary cultured neurospheres	brain
8	chr11:16128400-16133200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
9	chr11:16128600-16132400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
10	chr11:16128600-16133200	Weak transcription	Psoas Muscle	Psoas
11	chr11:16130400-16133200	Weak transcription	Left Ventricle	heart
12	chr11:16130800-16132200	Enhancers	Liver	Liver
13	chr11:16131000-16133200	Weak transcription	Right Atrium	heart
14	chr11:16131000-16133400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr11:16131000-16133400	Weak transcription	Esophagus	oesophagus
16	chr11:16131200-16135000	Weak transcription	Fetal Intestine Small	intestine
17	chr11:16131400-16133000	Enhancers	Pancreatic Islets	Pancreatic Islet
18	chr11:16131400-16133800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell

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