Variant report

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs11071505	0.88[EUR][1000 genomes]
rs11071507	0.88[EUR][1000 genomes]
rs1108436	1.00[GIH][hapmap]
rs16942151	0.91[EUR][1000 genomes]
rs16942152	1.00[GIH][hapmap];1.00[TSI][hapmap];0.83[EUR][1000 genomes]
rs16942154	1.00[GIH][hapmap];1.00[TSI][hapmap];0.83[EUR][1000 genomes]
rs16942155	1.00[GIH][hapmap];1.00[TSI][hapmap];0.83[EUR][1000 genomes]
rs16942157	1.00[GIH][hapmap];0.90[TSI][hapmap];0.83[EUR][1000 genomes]
rs16942159	1.00[GIH][hapmap];1.00[TSI][hapmap];0.83[EUR][1000 genomes]
rs16942161	0.91[EUR][1000 genomes]
rs16942203	1.00[EUR][1000 genomes]
rs2219994	0.87[EUR][1000 genomes]
rs56179061	0.91[EUR][1000 genomes]
rs57945434	0.91[EUR][1000 genomes]
rs58286054	0.88[EUR][1000 genomes]
rs7170920	0.91[EUR][1000 genomes]
rs73431228	0.83[EUR][1000 genomes]
rs73431232	0.83[EUR][1000 genomes]
rs73431248	0.83[EUR][1000 genomes]
rs73431251	0.83[EUR][1000 genomes]
rs73433226	0.91[EUR][1000 genomes]
rs73433229	0.91[EUR][1000 genomes]
rs73433258	0.87[EUR][1000 genomes]
rs73433262	0.91[EUR][1000 genomes]
rs73433264	0.91[EUR][1000 genomes]
rs73433268	0.91[EUR][1000 genomes]
rs8032146	0.83[EUR][1000 genomes]
rs8032569	0.91[EUR][1000 genomes]
rs993192	1.00[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs994139	0.91[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv904280	chr15:60042722-60524025	Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:60446400-60452000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr15:60447800-60452000	Weak transcription	Placenta Amnion	Placenta Amnion
3	chr15:60447800-60453200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
4	chr15:60448000-60451800	Weak transcription	Placenta	Placenta
5	chr15:60448000-60453200	Weak transcription	HUES48 Cell Line	embryonic stem cell
6	chr15:60448000-60453200	Weak transcription	HUES64 Cell Line	embryonic stem cell
7	chr15:60448000-60453400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
8	chr15:60448000-60453400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
9	chr15:60448200-60453000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
10	chr15:60448200-60453200	Weak transcription	HUES6 Cell Line	embryonic stem cell
11	chr15:60449400-60455400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived

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