Variant report

Variant	rs17109735
Chromosome Location	chr10:95824612-95824613
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 73 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:73)

rs_ID	r²[population]
rs1002636	0.84[EUR][1000 genomes]
rs10509668	0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10882382	0.81[EUR][1000 genomes]
rs10882383	0.84[EUR][1000 genomes]
rs10882386	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10882387	0.85[EUR][1000 genomes]
rs10882388	0.85[EUR][1000 genomes]
rs10882389	0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10882391	0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11187768	0.83[EUR][1000 genomes]
rs11187772	0.83[EUR][1000 genomes]
rs11187773	0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11187774	0.84[EUR][1000 genomes]
rs11187777	0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11187778	0.88[EUR][1000 genomes]
rs11187786	0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1157003	0.92[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1157004	0.92[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs12244322	0.80[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12254065	0.84[EUR][1000 genomes]
rs12257511	0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12266103	0.86[EUR][1000 genomes]
rs12268744	0.90[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs12356494	0.90[EUR][1000 genomes]
rs1343077	0.84[EUR][1000 genomes]
rs1361810	0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1418922	0.80[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1418923	0.86[EUR][1000 genomes]
rs17109671	0.85[EUR][1000 genomes]
rs17109674	0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17109746	0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1925242	0.87[EUR][1000 genomes]
rs1925243	0.86[EUR][1000 genomes]
rs1925244	0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1925248	0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1935962	0.84[EUR][1000 genomes]
rs1935963	0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1998707	0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1998708	0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2147738	0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2147740	0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2209442	0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3945750	0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4145083	0.82[EUR][1000 genomes]
rs4406757	0.85[EUR][1000 genomes]
rs4567381	0.92[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs4918042	0.88[EUR][1000 genomes]
rs4918043	0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4918044	0.90[EUR][1000 genomes]
rs4918045	0.90[EUR][1000 genomes]
rs4918057	0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4918070	0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs56406227	0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs56989927	0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6583926	0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7075952	0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7080228	0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7082337	0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7082530	0.83[EUR][1000 genomes]
rs7082622	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7082860	0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7084497	0.88[EUR][1000 genomes]
rs7088218	0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7088723	0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7089080	0.86[EUR][1000 genomes]
rs7096231	0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7096354	0.91[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7896839	0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7910822	0.85[EUR][1000 genomes]
rs7917353	0.86[EUR][1000 genomes]
rs7918106	0.86[EUR][1000 genomes]
rs7922612	0.88[EUR][1000 genomes]
rs992632	0.85[EUR][1000 genomes];0.80[ASN][1000 genomes]

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:95814000-95828600	Weak transcription	Cortex derived primary cultured neurospheres	brain
2	chr10:95814400-95836400	Weak transcription	Psoas Muscle	Psoas
3	chr10:95815800-95824800	Weak transcription	Rectal Mucosa Donor 29	rectum
4	chr10:95819200-95824800	Weak transcription	Sigmoid Colon	Sigmoid Colon
5	chr10:95820400-95832800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr10:95823000-95836400	Weak transcription	Aorta	Aorta
7	chr10:95823200-95830800	Enhancers	Fetal Intestine Small	intestine
8	chr10:95823600-95830400	Enhancers	Fetal Intestine Large	intestine
9	chr10:95824200-95826000	Enhancers	Rectal Mucosa Donor 31	rectum
10	chr10:95824200-95827000	Enhancers	Fetal Muscle Leg	muscle
11	chr10:95824400-95825000	Enhancers	A549	lung
12	chr10:95824400-95825200	Enhancers	Small Intestine	intestine
13	chr10:95824400-95825600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
14	chr10:95824400-95825800	Enhancers	Duodenum Mucosa	Duodenum
15	chr10:95824400-95826000	Enhancers	Liver	Liver
16	chr10:95824600-95825600	Enhancers	Muscle Satellite Cultured Cells	--

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