Variant report

Variant	rs1157004
Chromosome Location	chr10:95815963-95815964
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 74 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:74)

rs_ID	r²[population]
rs1002636	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10509668	0.87[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10882382	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10882383	0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10882385	0.99[AMR][1000 genomes];0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10882386	0.86[EUR][1000 genomes]
rs10882387	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10882388	0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10882389	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10882391	0.80[AMR][1000 genomes];0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11187768	0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11187772	1.00[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11187773	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11187774	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11187777	0.88[EUR][1000 genomes]
rs11187778	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11187786	0.85[EUR][1000 genomes]
rs1157003	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12244322	0.89[EUR][1000 genomes]
rs12254065	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12257511	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12266103	0.84[AFR][1000 genomes];0.99[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12268744	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12356494	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1343077	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1361810	0.87[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1418922	0.88[EUR][1000 genomes]
rs1418923	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17109671	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17109674	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs17109735	0.92[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs17109746	0.85[EUR][1000 genomes]
rs1925242	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1925243	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1925244	0.80[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1925248	0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1935962	0.97[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1935963	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1998707	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1998708	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2147738	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2147740	0.80[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2209442	0.80[AMR][1000 genomes];0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs3945750	0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4145083	0.86[EUR][1000 genomes]
rs4406757	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4567381	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4918042	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4918043	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs4918044	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4918045	0.99[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4918057	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4918070	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs56406227	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs56989927	0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6583926	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7075952	0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7080228	0.89[EUR][1000 genomes]
rs7082337	0.80[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7082530	0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7082622	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7082860	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7084497	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7088218	0.80[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7088723	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7089080	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7096231	0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7096354	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7896839	0.86[EUR][1000 genomes]
rs7910822	0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7917353	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7918106	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7922612	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs992632	0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:95803400-95819800	Weak transcription	Fetal Intestine Large	intestine
2	chr10:95806400-95822600	Weak transcription	Fetal Intestine Small	intestine
3	chr10:95807600-95816000	Weak transcription	Skeletal Muscle Female	skeletal muscle
4	chr10:95813800-95821600	Weak transcription	Muscle Satellite Cultured Cells	--
5	chr10:95814000-95828600	Weak transcription	Cortex derived primary cultured neurospheres	brain
6	chr10:95814200-95822800	Weak transcription	Aorta	Aorta
7	chr10:95814400-95824200	Weak transcription	Fetal Muscle Leg	muscle
8	chr10:95814400-95836400	Weak transcription	Psoas Muscle	Psoas
9	chr10:95815400-95816000	Enhancers	A549	lung
10	chr10:95815600-95816000	Enhancers	ES-I3 Cell Line	embryonic stem cell
11	chr10:95815600-95816000	Enhancers	ES-WA7 Cell Line	embryonic stem cell
12	chr10:95815600-95816000	Enhancers	iPS-18 Cell Line	embryonic stem cell
13	chr10:95815600-95816200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
14	chr10:95815600-95816400	Enhancers	HUES64 Cell Line	embryonic stem cell
15	chr10:95815800-95818800	Weak transcription	Sigmoid Colon	Sigmoid Colon
16	chr10:95815800-95824800	Weak transcription	Rectal Mucosa Donor 29	rectum

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