Variant report

Variant	rs12356494
Chromosome Location	chr10:95814569-95814570
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 74 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:74)

rs_ID	r²[population]
rs1002636	0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10509668	0.85[EUR][1000 genomes]
rs10882382	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs10882383	0.99[AMR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10882385	0.93[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs10882386	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs10882387	0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10882388	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10882389	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs10882391	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs11187768	0.97[AMR][1000 genomes];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11187772	0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11187773	0.85[EUR][1000 genomes]
rs11187774	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11187777	0.86[EUR][1000 genomes]
rs11187778	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11187786	0.83[EUR][1000 genomes]
rs1157003	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1157004	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12244322	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12254065	0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12257511	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12266103	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12268744	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1343077	0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1361810	0.85[EUR][1000 genomes]
rs1418922	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs1418923	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs17109671	0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs17109674	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs17109735	0.90[EUR][1000 genomes]
rs17109746	0.83[EUR][1000 genomes]
rs1925242	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1925243	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1925244	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs1925248	0.90[EUR][1000 genomes]
rs1935962	0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1935963	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1998707	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1998708	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2147738	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2147740	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2209442	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs3945750	0.90[EUR][1000 genomes]
rs4145083	0.84[EUR][1000 genomes]
rs4406757	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4567381	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4918042	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4918043	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4918044	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4918045	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4918057	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4918070	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs56406227	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs56989927	0.90[EUR][1000 genomes]
rs6583926	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7075952	0.91[EUR][1000 genomes]
rs7080228	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs7082337	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7082530	0.99[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7082622	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7082860	0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7084497	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7088218	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7088723	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7089080	0.99[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7096231	0.90[EUR][1000 genomes]
rs7096354	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7896839	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7910822	0.99[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7917353	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7918106	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7922612	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs992632	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:95803400-95819800	Weak transcription	Fetal Intestine Large	intestine
2	chr10:95803600-95815400	Weak transcription	Sigmoid Colon	Sigmoid Colon
3	chr10:95806400-95822600	Weak transcription	Fetal Intestine Small	intestine
4	chr10:95807600-95816000	Weak transcription	Skeletal Muscle Female	skeletal muscle
5	chr10:95813200-95815600	Weak transcription	HUES64 Cell Line	embryonic stem cell
6	chr10:95813200-95815600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
7	chr10:95813800-95821600	Weak transcription	Muscle Satellite Cultured Cells	--
8	chr10:95814000-95828600	Weak transcription	Cortex derived primary cultured neurospheres	brain
9	chr10:95814200-95815400	Weak transcription	A549	lung
10	chr10:95814200-95822800	Weak transcription	Aorta	Aorta
11	chr10:95814400-95824200	Weak transcription	Fetal Muscle Leg	muscle
12	chr10:95814400-95836400	Weak transcription	Psoas Muscle	Psoas

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