The 2.0 version of rSNPBase

Variant report

Variant rs17350133
Chromosome Location chr6:128542759-128542760
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:128488200-128565200 Weak transcription Fetal Stomach stomach
2 chr6:128492600-128567800 Weak transcription Ovary ovary
3 chr6:128505800-128552200 Weak transcription Duodenum Mucosa Duodenum
4 chr6:128506000-128561000 Weak transcription Breast Myoepithelial Primary Cells Breast
5 chr6:128520400-128573800 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr6:128522000-128560800 Weak transcription Primary T cells from cord blood blood
7 chr6:128523800-128543600 Weak transcription Left Ventricle heart
8 chr6:128527000-128543600 Weak transcription Fetal Intestine Small intestine
9 chr6:128527600-128561000 Weak transcription Esophagus oesophagus
10 chr6:128528200-128558400 Weak transcription Brain Cingulate Gyrus brain
11 chr6:128528400-128561000 Weak transcription Fetal Brain Male brain
12 chr6:128529400-128552600 Weak transcription Small Intestine intestine
13 chr6:128529800-128561000 Weak transcription Stomach Smooth Muscle stomach
14 chr6:128531000-128550600 Weak transcription Brain Inferior Temporal Lobe brain
15 chr6:128531000-128562400 Weak transcription Aorta Aorta
16 chr6:128531200-128554600 Weak transcription Right Ventricle heart
17 chr6:128531200-128562400 Weak transcription HSMMtube muscle
18 chr6:128531200-128567800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr6:128531200-128573800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr6:128531400-128543200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
21 chr6:128531400-128553600 Weak transcription Muscle Satellite Cultured Cells --
22 chr6:128532000-128545600 Weak transcription NHEK skin
23 chr6:128532000-128554400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
24 chr6:128532000-128561000 Weak transcription Osteobl bone
25 chr6:128532200-128553200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr6:128535600-128543400 Weak transcription Stomach Mucosa stomach
27 chr6:128536000-128554800 Weak transcription Brain Substantia Nigra brain
28 chr6:128536800-128560600 Weak transcription Fetal Lung lung
29 chr6:128537200-128561000 Weak transcription Fetal Muscle Leg muscle
30 chr6:128537400-128543600 Weak transcription Gastric stomach
31 chr6:128537600-128573800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
32 chr6:128539800-128543000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr6:128539800-128552400 Weak transcription Liver Liver
34 chr6:128539800-128558200 Weak transcription NH-A brain
35 chr6:128540000-128547200 Weak transcription HMEC breast
36 chr6:128540200-128552800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr6:128540200-128556600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr6:128540200-128559600 Weak transcription Primary B cells from peripheral blood blood
39 chr6:128540200-128561000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr6:128540200-128564800 Weak transcription Duodenum Smooth Muscle Duodenum
41 chr6:128540400-128545600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr6:128540400-128551200 Weak transcription HSMM muscle
43 chr6:128540400-128554400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr6:128540400-128560400 Weak transcription Fetal Thymus thymus
45 chr6:128540400-128560400 Weak transcription HUVEC blood vessel
46 chr6:128540400-128569400 Weak transcription Rectal Mucosa Donor 29 rectum
47 chr6:128540600-128550200 Weak transcription Fetal Intestine Large intestine
48 chr6:128540600-128561000 Weak transcription Rectal Mucosa Donor 31 rectum
49 chr6:128540800-128543200 Weak transcription Pancreas Pancrea
50 chr6:128540800-128543600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived

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Last update: Aug 31, 2015