The 2.0 version of rSNPBase

Variant report

Variant rs17623125
Chromosome Location chr17:46410661-46410662
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:27 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:46373200-46415000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr17:46375800-46415800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr17:46377200-46421000 Weak transcription Primary T killer naive cells fromperipheralblood blood
4 chr17:46390200-46429400 Weak transcription Primary T killer memory cells from peripheral blood blood
5 chr17:46391000-46420200 Weak transcription Primary B cells from peripheral blood blood
6 chr17:46391200-46421200 Weak transcription Primary T helper naive cells from peripheral blood blood
7 chr17:46396200-46421200 Weak transcription Primary T helper naive cells fromperipheralblood blood
8 chr17:46396800-46414400 Weak transcription Primary T cells from cord blood blood
9 chr17:46406200-46410800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
10 chr17:46406200-46411000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr17:46406200-46413200 Weak transcription Primary T helper cells PMA-I stimulated --
12 chr17:46406400-46421800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
13 chr17:46406800-46419600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
14 chr17:46407800-46411000 Strong transcription Primary T helper cells fromperipheralblood blood
15 chr17:46408000-46421000 Weak transcription Fetal Thymus thymus
16 chr17:46408600-46415000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
17 chr17:46408800-46422400 Weak transcription Thymus Thymus
18 chr17:46409000-46415200 Weak transcription Primary T cells fromperipheralblood blood
19 chr17:46410200-46410800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr17:46410200-46410800 Bivalent Enhancer HSMM muscle
21 chr17:46410200-46411000 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr17:46410400-46411200 Weak transcription Primary T regulatory cells fromperipheralblood blood
23 chr17:46410400-46411200 Enhancers GM12878-XiMat blood
24 chr17:46410400-46411400 Flanking Active TSS A549 lung
25 chr17:46410600-46410800 Bivalent Enhancer NHEK skin
26 chr17:46410600-46411000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
27 chr17:46410600-46411000 Flanking Active TSS NHDF-Ad bronchial

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Last update: Aug 31, 2015