Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10487472	0.82[EUR][1000 genomes]
rs12334074	0.87[EUR][1000 genomes]
rs17862333	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs17862345	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17863257	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs17864165	1.00[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs17864170	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs17865066	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs17865434	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs17866153	0.82[EUR][1000 genomes]
rs17866414	1.00[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs17866742	0.82[EUR][1000 genomes]
rs17866749	0.91[EUR][1000 genomes]
rs17867232	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17867806	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs17867809	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs17867821	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17869261	1.00[AMR][1000 genomes]
rs17869543	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17875093	0.81[ASN][1000 genomes]
rs62468892	0.82[EUR][1000 genomes]
rs62468898	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs62468908	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv889189	chr7:126699088-126963028	Active TSS Bivalent/Poised TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:126929600-126931000	Enhancers	Fetal Stomach	stomach
2	chr7:126930000-126931600	Enhancers	Fetal Brain Male	brain
3	chr7:126930600-126931000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin

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