Variant report

Variant	rs1951191
Chromosome Location	chr14:32921867-32921868
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 31 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs11156745	0.91[ASN][1000 genomes]
rs11156746	0.89[ASN][1000 genomes]
rs11628453	0.92[ASN][1000 genomes]
rs1815234	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs1951189	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1957013	0.86[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1957015	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1957016	0.97[ASN][1000 genomes]
rs1957018	0.97[ASN][1000 genomes]
rs1957019	0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2224430	0.96[ASN][1000 genomes]
rs2224431	0.81[ASN][1000 genomes]
rs2383302	0.86[AFR][1000 genomes];0.98[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs3784191	0.81[ASN][1000 genomes]
rs3784193	0.81[ASN][1000 genomes]
rs4329831	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs56837786	0.84[ASN][1000 genomes]
rs6571518	1.00[ASN][1000 genomes]
rs71419908	0.98[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs7146377	0.83[ASN][1000 genomes]
rs7147629	0.85[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs8013463	0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9285570	0.82[ASN][1000 genomes]
rs941746	0.82[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs941747	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs941748	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs9972146	0.84[ASN][1000 genomes]
rs9972147	0.83[ASN][1000 genomes]
rs9972192	0.80[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2758352	chr14:32858480-33016442	Enhancers Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	esv2759978	chr14:32858480-33016442	Enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:32909000-32923400	Weak transcription	Stomach Smooth Muscle	stomach
2	chr14:32914400-32923000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
3	chr14:32919200-32926400	Weak transcription	NHDF-Ad	bronchial
4	chr14:32919400-32923200	Weak transcription	Brain Inferior Temporal Lobe	brain
5	chr14:32919400-32923400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr14:32919600-32926800	Weak transcription	Aorta	Aorta
7	chr14:32919800-32926200	Weak transcription	Brain Cingulate Gyrus	brain
8	chr14:32920800-32922200	Weak transcription	Colon Smooth Muscle	Colon
9	chr14:32920800-32923200	Weak transcription	Muscle Satellite Cultured Cells	--
10	chr14:32920800-32923200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
11	chr14:32920800-32923200	Weak transcription	Rectal Smooth Muscle	rectum
12	chr14:32920800-32923400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr14:32920800-32926200	Weak transcription	Brain Anterior Caudate	brain
14	chr14:32920800-32926600	Weak transcription	Brain Hippocampus Middle	brain
15	chr14:32920800-32930200	Weak transcription	Cortex derived primary cultured neurospheres	brain
16	chr14:32921600-32923200	Enhancers	Fetal Heart	heart
17	chr14:32921600-32926400	Weak transcription	Brain Substantia Nigra	brain
18	chr14:32921800-32923800	Enhancers	Fetal Lung	lung

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