Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:32908071..32910208-chr14:32913357..32914973,2	K562	blood:
2	chr14:32912752..32915224-chr14:32918324..32920883,2	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-C14orf126-11	chr14:32914214-32914511	uc_367_-
2	lnc-ARHGAP5-3	chr14:32914214-32914511	uc_367_+

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs11156745	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11156746	0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11628453	0.97[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17409829	1.00[YRI][hapmap]
rs1951189	0.94[ASN][1000 genomes]
rs1951191	0.85[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs1957013	0.97[ASN][1000 genomes]
rs1957015	0.96[ASN][1000 genomes]
rs1957016	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1957018	0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1957019	0.97[ASN][1000 genomes]
rs1957020	0.81[AMR][1000 genomes]
rs2224430	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2224431	0.81[ASN][1000 genomes]
rs2383302	1.00[YRI][hapmap]
rs3784191	0.81[ASN][1000 genomes]
rs3784193	0.81[ASN][1000 genomes]
rs4329831	0.92[ASN][1000 genomes]
rs56837786	0.84[ASN][1000 genomes]
rs6571518	0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7146377	1.00[YRI][hapmap];0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7157747	0.97[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs8013463	1.00[ASN][1000 genomes]
rs9285570	0.82[ASN][1000 genomes]
rs941746	1.00[YRI][hapmap];0.97[ASN][1000 genomes]
rs9972146	0.84[ASN][1000 genomes]
rs9972147	0.80[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9972192	0.80[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2758352	chr14:32858480-33016442	Enhancers Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	esv2759978	chr14:32858480-33016442	Enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv983766	chr14:32914108-32915963	Enhancers Weak transcription	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:32908600-32915600	Weak transcription	Duodenum Smooth Muscle	Duodenum
2	chr14:32908600-32920200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr14:32908600-32920200	Weak transcription	Rectal Smooth Muscle	rectum
4	chr14:32908800-32919000	Weak transcription	Right Ventricle	heart
5	chr14:32909000-32919000	Weak transcription	Cortex derived primary cultured neurospheres	brain
6	chr14:32909000-32919000	Weak transcription	Ovary	ovary
7	chr14:32909000-32923400	Weak transcription	Stomach Smooth Muscle	stomach
8	chr14:32911800-32918800	Weak transcription	Aorta	Aorta
9	chr14:32912600-32914600	Enhancers	Brain Angular Gyrus	brain
10	chr14:32912600-32915200	Enhancers	Brain Inferior Temporal Lobe	brain
11	chr14:32912800-32914600	Enhancers	Brain Cingulate Gyrus	brain
12	chr14:32914200-32916200	Weak transcription	Brain Anterior Caudate	brain
13	chr14:32914400-32916200	Weak transcription	Fetal Lung	lung
14	chr14:32914400-32916400	Weak transcription	Brain Substantia Nigra	brain
15	chr14:32914400-32919200	Weak transcription	Brain Hippocampus Middle	brain
16	chr14:32914400-32923000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain

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