Variant report

Variant rs1980266
Chromosome Location chr4:78742991-78742992
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:78741600-78743200 Flanking Active TSS Primary T helper cells fromperipheralblood blood
2 chr4:78741600-78743400 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
3 chr4:78741600-78743400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
4 chr4:78741800-78743200 Flanking Active TSS Primary B cells from cord blood blood
5 chr4:78741800-78743400 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
6 chr4:78742000-78743200 Flanking Active TSS Primary T cells fromperipheralblood blood
7 chr4:78742000-78743400 Flanking Active TSS Primary T cells from cord blood blood
8 chr4:78742000-78743400 Flanking Active TSS Primary T helper cells PMA-I stimulated --
9 chr4:78742000-78743400 Flanking Active TSS Dnd41 blood
10 chr4:78742000-78743600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
11 chr4:78742000-78743800 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
12 chr4:78742200-78743400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr4:78742200-78743400 Enhancers Spleen Spleen
14 chr4:78742200-78744000 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
15 chr4:78742400-78743000 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr4:78742400-78743000 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
17 chr4:78742400-78743000 Enhancers Placenta Placenta
18 chr4:78742400-78743200 Enhancers HSMM muscle
19 chr4:78742400-78743400 Enhancers Fetal Adrenal Gland Adrenal Gland
20 chr4:78742400-78744000 Enhancers Fetal Muscle Leg muscle
21 chr4:78742400-78744400 Enhancers Primary monocytes fromperipheralblood blood
22 chr4:78742600-78743000 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
23 chr4:78742600-78743000 Enhancers Cortex derived primary cultured neurospheres brain
24 chr4:78742600-78743000 Enhancers HMEC breast
25 chr4:78742600-78743200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr4:78742600-78743200 Enhancers Brain Hippocampus Middle brain
27 chr4:78742600-78743200 Enhancers Brain Inferior Temporal Lobe brain
28 chr4:78742600-78743200 Enhancers Brain Substantia Nigra brain
29 chr4:78742600-78743200 Weak transcription Right Atrium heart
30 chr4:78742600-78743200 Enhancers Hela-S3 cervix
31 chr4:78742600-78743200 Enhancers K562 blood
32 chr4:78742600-78743400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
33 chr4:78742600-78743400 Enhancers Adipose Nuclei Adipose
34 chr4:78742600-78743400 Enhancers Brain Cingulate Gyrus brain
35 chr4:78742600-78743600 Enhancers Primary neutrophils fromperipheralblood blood
36 chr4:78742600-78743600 Enhancers Duodenum Smooth Muscle Duodenum
37 chr4:78742800-78743000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr4:78742800-78743000 Enhancers Liver Liver
39 chr4:78742800-78743000 Active TSS Rectal Mucosa Donor 29 rectum
40 chr4:78742800-78743200 Enhancers Primary hematopoietic stem cells blood
41 chr4:78742800-78743200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
42 chr4:78742800-78743200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
43 chr4:78742800-78743200 Enhancers Primary T killer memory cells from peripheral blood blood
44 chr4:78742800-78743200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
45 chr4:78742800-78743200 Enhancers Brain Angular Gyrus brain
46 chr4:78742800-78743200 Enhancers Brain Anterior Caudate brain
47 chr4:78742800-78743200 Active TSS Stomach Smooth Muscle stomach
48 chr4:78742800-78743200 Enhancers GM12878-XiMat blood
49 chr4:78742800-78743400 Enhancers Breast Myoepithelial Primary Cells Breast
50 chr4:78742800-78743400 Enhancers Brain Dorsolateral Prefrontal Cortex brain

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