The 2.0 version of rSNPBase

Variant report

Variant rs6533274
Chromosome Location chr4:78733513-78733514
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:78718800-78738600 Weak transcription Brain Inferior Temporal Lobe brain
2 chr4:78720800-78735600 Weak transcription HepG2 liver
3 chr4:78722200-78738600 Weak transcription HSMM muscle
4 chr4:78722400-78734800 Weak transcription Fetal Intestine Large intestine
5 chr4:78722600-78735800 Weak transcription A549 lung
6 chr4:78722600-78737800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr4:78722600-78737800 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr4:78722600-78738600 Weak transcription NHEK skin
9 chr4:78722600-78739000 Weak transcription Ovary ovary
10 chr4:78722600-78739200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
11 chr4:78722800-78736800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr4:78722800-78738600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr4:78723000-78734800 Weak transcription Sigmoid Colon Sigmoid Colon
14 chr4:78723000-78738600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr4:78723200-78738600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
16 chr4:78724000-78735000 Weak transcription Breast Myoepithelial Primary Cells Breast
17 chr4:78724000-78736000 Weak transcription HUVEC blood vessel
18 chr4:78724000-78736800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr4:78724200-78733600 Weak transcription Primary B cells from cord blood blood
20 chr4:78724400-78735600 Weak transcription Liver Liver
21 chr4:78724400-78738600 Weak transcription Colonic Mucosa Colon
22 chr4:78724800-78738600 Weak transcription Brain Substantia Nigra brain
23 chr4:78725600-78734800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
24 chr4:78725800-78736800 Enhancers Primary T killer naive cells fromperipheralblood blood
25 chr4:78725800-78738600 Enhancers Primary T helper naive cells from peripheral blood blood
26 chr4:78727200-78737800 Weak transcription Primary neutrophils fromperipheralblood blood
27 chr4:78727400-78735600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr4:78727400-78735800 Weak transcription Primary hematopoietic stem cells short term culture blood
29 chr4:78727400-78735800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr4:78728600-78733800 Enhancers Primary T killer memory cells from peripheral blood blood
31 chr4:78728600-78738600 Weak transcription Psoas Muscle Psoas
32 chr4:78728800-78736600 Weak transcription Brain Hippocampus Middle brain
33 chr4:78728800-78738600 Weak transcription Fetal Adrenal Gland Adrenal Gland
34 chr4:78729000-78736600 Weak transcription Colon Smooth Muscle Colon
35 chr4:78730400-78738600 Weak transcription K562 blood
36 chr4:78732000-78734000 Genic enhancers Primary T helper memory cells from peripheral blood 1 blood
37 chr4:78732200-78733600 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
38 chr4:78732200-78735400 Enhancers Primary T regulatory cells fromperipheralblood blood
39 chr4:78732200-78736200 Enhancers Primary T helper naive cells fromperipheralblood blood
40 chr4:78732200-78736400 Weak transcription Primary hematopoietic stem cells blood
41 chr4:78732200-78736400 Weak transcription Brain Anterior Caudate brain
42 chr4:78732200-78736600 Weak transcription Aorta Aorta
43 chr4:78732200-78738600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr4:78732400-78733600 Strong transcription Fetal Intestine Small intestine
45 chr4:78732400-78738600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
46 chr4:78732600-78733600 Enhancers Primary monocytes fromperipheralblood blood
47 chr4:78732800-78733800 Genic enhancers Fetal Thymus thymus
48 chr4:78732800-78734800 Weak transcription Skeletal Muscle Female skeletal muscle
49 chr4:78732800-78735200 Weak transcription Duodenum Smooth Muscle Duodenum
50 chr4:78732800-78735800 Weak transcription Skeletal Muscle Male skeletal muscle

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Last update: Aug 31, 2015