The 2.0 version of rSNPBase

Variant report

Variant rs4541532
Chromosome Location chr4:78733128-78733129
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:78716400-78733400 Weak transcription Fetal Muscle Trunk muscle
2 chr4:78718800-78738600 Weak transcription Brain Inferior Temporal Lobe brain
3 chr4:78720800-78735600 Weak transcription HepG2 liver
4 chr4:78722200-78738600 Weak transcription HSMM muscle
5 chr4:78722400-78734800 Weak transcription Fetal Intestine Large intestine
6 chr4:78722600-78735800 Weak transcription A549 lung
7 chr4:78722600-78737800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
8 chr4:78722600-78737800 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr4:78722600-78738600 Weak transcription NHEK skin
10 chr4:78722600-78739000 Weak transcription Ovary ovary
11 chr4:78722600-78739200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
12 chr4:78722800-78736800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr4:78722800-78738600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr4:78723000-78734800 Weak transcription Sigmoid Colon Sigmoid Colon
15 chr4:78723000-78738600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
16 chr4:78723200-78738600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
17 chr4:78724000-78735000 Weak transcription Breast Myoepithelial Primary Cells Breast
18 chr4:78724000-78736000 Weak transcription HUVEC blood vessel
19 chr4:78724000-78736800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr4:78724200-78733600 Weak transcription Primary B cells from cord blood blood
21 chr4:78724400-78735600 Weak transcription Liver Liver
22 chr4:78724400-78738600 Weak transcription Colonic Mucosa Colon
23 chr4:78724800-78738600 Weak transcription Brain Substantia Nigra brain
24 chr4:78725600-78734800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
25 chr4:78725800-78736800 Enhancers Primary T killer naive cells fromperipheralblood blood
26 chr4:78725800-78738600 Enhancers Primary T helper naive cells from peripheral blood blood
27 chr4:78727200-78737800 Weak transcription Primary neutrophils fromperipheralblood blood
28 chr4:78727400-78735600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr4:78727400-78735800 Weak transcription Primary hematopoietic stem cells short term culture blood
30 chr4:78727400-78735800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr4:78728600-78733800 Enhancers Primary T killer memory cells from peripheral blood blood
32 chr4:78728600-78738600 Weak transcription Psoas Muscle Psoas
33 chr4:78728800-78736600 Weak transcription Brain Hippocampus Middle brain
34 chr4:78728800-78738600 Weak transcription Fetal Adrenal Gland Adrenal Gland
35 chr4:78729000-78736600 Weak transcription Colon Smooth Muscle Colon
36 chr4:78730400-78738600 Weak transcription K562 blood
37 chr4:78731200-78733200 Enhancers Primary T helper 17 cells PMA-I stimulated --
38 chr4:78731400-78733200 Genic enhancers Primary T helper cells fromperipheralblood blood
39 chr4:78731800-78733200 Genic enhancers Primary T helper cells PMA-I stimulated --
40 chr4:78731800-78733200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
41 chr4:78732000-78733200 Genic enhancers Dnd41 blood
42 chr4:78732000-78734000 Genic enhancers Primary T helper memory cells from peripheral blood 1 blood
43 chr4:78732200-78733600 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
44 chr4:78732200-78735400 Enhancers Primary T regulatory cells fromperipheralblood blood
45 chr4:78732200-78736200 Enhancers Primary T helper naive cells fromperipheralblood blood
46 chr4:78732200-78736400 Weak transcription Primary hematopoietic stem cells blood
47 chr4:78732200-78736400 Weak transcription Brain Anterior Caudate brain
48 chr4:78732200-78736600 Weak transcription Aorta Aorta
49 chr4:78732200-78738600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr4:78732400-78733600 Strong transcription Fetal Intestine Small intestine

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Last update: Aug 31, 2015