Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:140468617..140471093-chr6:140487211..140489040,2	K562	blood:

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10457036	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10457701	0.93[ASN][1000 genomes]
rs10457702	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10457704	0.86[EUR][1000 genomes]
rs10484713	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs11155102	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12198267	0.92[EUR][1000 genomes]
rs12198595	0.93[ASN][1000 genomes]
rs12202850	0.93[ASN][1000 genomes]
rs12204306	0.93[ASN][1000 genomes]
rs12204906	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12205335	0.93[ASN][1000 genomes]
rs12206900	0.86[EUR][1000 genomes]
rs12206912	0.83[EUR][1000 genomes]
rs12210614	0.90[EUR][1000 genomes]
rs12212163	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12212554	0.93[ASN][1000 genomes]
rs12213758	0.86[EUR][1000 genomes]
rs169291	0.86[AFR][1000 genomes];0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17318	0.86[EUR][1000 genomes]
rs201285	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs34059065	0.93[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869066	chr6:139777114-140639695	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	26 gene(s)	inside rSNPs	diseases
2	nsv1016532	chr6:140174639-141029988	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	17 gene(s)	inside rSNPs	diseases
3	nsv886693	chr6:140444057-140578494	Weak transcription Active TSS Flanking Active TSS Enhancers ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases
4	esv1825718	chr6:140476088-140584384	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:140481600-140488600	Weak transcription	K562	blood

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