Variant report

Variant	rs2081102
Chromosome Location	chr5:41662285-41662286
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 91 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:91)

rs_ID	r²[population]
rs10941559	0.83[EUR][1000 genomes]
rs11739106	0.85[EUR][1000 genomes]
rs11739257	0.85[EUR][1000 genomes]
rs11740524	0.83[EUR][1000 genomes]
rs11740946	0.86[EUR][1000 genomes]
rs11744279	0.86[EUR][1000 genomes]
rs11744516	0.86[EUR][1000 genomes]
rs11744623	0.83[EUR][1000 genomes]
rs11746511	0.85[EUR][1000 genomes]
rs11747881	0.86[EUR][1000 genomes]
rs11747921	0.86[EUR][1000 genomes]
rs11749008	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11750760	0.86[EUR][1000 genomes]
rs11750790	0.86[EUR][1000 genomes]
rs13153468	0.86[EUR][1000 genomes]
rs13153837	0.85[EUR][1000 genomes]
rs13155338	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs13162040	0.86[EUR][1000 genomes]
rs13163137	0.86[EUR][1000 genomes]
rs13164201	0.85[EUR][1000 genomes]
rs13165731	0.84[EUR][1000 genomes]
rs13168035	0.86[EUR][1000 genomes]
rs13169285	0.98[AFR][1000 genomes];0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs13169977	0.86[EUR][1000 genomes]
rs13176368	0.86[EUR][1000 genomes]
rs13177937	0.86[EUR][1000 genomes]
rs13179852	0.86[EUR][1000 genomes]
rs13180475	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13182336	0.86[EUR][1000 genomes]
rs13185973	0.86[EUR][1000 genomes]
rs13186086	0.82[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs13189403	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs1345781	0.80[AFR][1000 genomes];0.83[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs1389756	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1508815	0.86[EUR][1000 genomes]
rs16871955	0.86[EUR][1000 genomes]
rs16871972	0.85[EUR][1000 genomes]
rs16900142	0.83[EUR][1000 genomes]
rs1876653	0.83[EUR][1000 genomes]
rs1876654	0.81[EUR][1000 genomes]
rs33967331	0.86[EUR][1000 genomes]
rs34048302	0.80[AFR][1000 genomes];0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs34071445	0.86[EUR][1000 genomes]
rs34193394	0.99[EUR][1000 genomes]
rs34329864	0.86[EUR][1000 genomes]
rs34339137	0.86[EUR][1000 genomes]
rs34369972	0.86[EUR][1000 genomes]
rs34412181	0.83[AFR][1000 genomes];0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs34500930	0.86[EUR][1000 genomes]
rs34569700	0.86[EUR][1000 genomes]
rs34625465	0.86[EUR][1000 genomes]
rs34663371	0.86[EUR][1000 genomes]
rs34841703	0.86[EUR][1000 genomes]
rs34873414	0.86[EUR][1000 genomes]
rs34898214	0.82[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs35077044	0.86[EUR][1000 genomes]
rs35252930	0.86[EUR][1000 genomes]
rs35343042	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs35613904	0.83[EUR][1000 genomes]
rs35691805	0.80[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs35764180	0.82[AFR][1000 genomes];0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs35861205	0.86[EUR][1000 genomes]
rs36005620	0.86[EUR][1000 genomes]
rs36113900	0.86[EUR][1000 genomes]
rs3926618	0.83[EUR][1000 genomes]
rs4957430	0.85[EUR][1000 genomes]
rs55817686	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs56017638	0.86[EUR][1000 genomes]
rs60209308	0.86[EUR][1000 genomes]
rs62360521	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs62360542	0.85[AFR][1000 genomes];0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs66820325	0.85[EUR][1000 genomes]
rs67114999	0.86[EUR][1000 genomes]
rs67206815	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs67715253	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs67869805	0.82[EUR][1000 genomes]
rs6866549	0.86[EUR][1000 genomes]
rs6879341	0.86[EUR][1000 genomes]
rs6881873	0.85[EUR][1000 genomes]
rs6883144	0.86[EUR][1000 genomes]
rs6888816	0.86[EUR][1000 genomes]
rs6889217	0.86[EUR][1000 genomes]
rs72746918	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs72746919	0.87[EUR][1000 genomes]
rs72746957	0.86[EUR][1000 genomes]
rs7709500	0.86[EUR][1000 genomes]
rs7712911	0.81[EUR][1000 genomes]
rs7724934	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs951883	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs964267	0.86[EUR][1000 genomes]
rs9687619	0.83[EUR][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:41658800-41663000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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