Variant report

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10178950	1.00[AMR][1000 genomes]
rs12694185	1.00[AMR][1000 genomes]
rs1355192	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1355194	0.85[YRI][hapmap];1.00[AMR][1000 genomes]
rs1509466	0.82[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1509473	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1858140	1.00[AMR][1000 genomes]
rs1858141	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1976583	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2663657	0.87[AFR][1000 genomes]
rs2710471	0.85[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2710481	0.87[AFR][1000 genomes]
rs2710483	0.87[AFR][1000 genomes]
rs2710484	0.87[AFR][1000 genomes]
rs2710485	0.87[AFR][1000 genomes]
rs288069	1.00[AMR][1000 genomes]
rs288074	0.85[YRI][hapmap];1.00[AMR][1000 genomes]
rs288078	0.82[YRI][hapmap];1.00[AMR][1000 genomes]
rs288082	0.82[YRI][hapmap];1.00[AMR][1000 genomes]
rs288083	0.85[YRI][hapmap];1.00[AMR][1000 genomes]
rs288086	0.85[YRI][hapmap];1.00[AMR][1000 genomes]
rs288092	1.00[AMR][1000 genomes]
rs288093	1.00[AMR][1000 genomes]
rs6435532	0.85[YRI][hapmap];0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6435534	0.83[AFR][1000 genomes]
rs6744370	0.82[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7568267	0.85[YRI][hapmap];0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs925263	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:210476600-210493600	Weak transcription	Aorta	Aorta
2	chr2:210479200-210484600	Weak transcription	Fetal Brain Male	brain
3	chr2:210480000-210493200	Weak transcription	Brain Germinal Matrix	brain
4	chr2:210481000-210484400	Weak transcription	Cortex derived primary cultured neurospheres	brain
5	chr2:210481000-210486400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
6	chr2:210481000-210493400	Weak transcription	Pancreas	Pancrea
7	chr2:210481000-210500400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
8	chr2:210481200-210484200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
9	chr2:210481400-210493600	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
10	chr2:210481600-210484600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
11	chr2:210481600-210487800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
12	chr2:210482400-210484400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr2:210482600-210484400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
14	chr2:210483400-210484400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr2:210483800-210485000	Enhancers	HUVEC	blood vessel

Quick Search: