Variant report

Variant	rs288086
Chromosome Location	chr2:210423377-210423378
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 28 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10178950	1.00[AMR][1000 genomes]
rs12694185	1.00[AMR][1000 genomes]
rs1355192	1.00[AMR][1000 genomes]
rs1355194	1.00[YRI][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1509466	1.00[YRI][hapmap];1.00[AMR][1000 genomes]
rs1509473	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1858140	1.00[AMR][1000 genomes]
rs1858141	1.00[YRI][hapmap];0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1976583	1.00[AMR][1000 genomes]
rs2366111	0.85[YRI][hapmap];1.00[AMR][1000 genomes]
rs2663657	0.83[YRI][hapmap];0.82[AFR][1000 genomes]
rs2710471	0.85[YRI][hapmap];1.00[AMR][1000 genomes]
rs2710481	0.83[YRI][hapmap];0.82[AFR][1000 genomes]
rs2710483	0.83[YRI][hapmap];0.82[AFR][1000 genomes]
rs2710484	0.83[YRI][hapmap];0.82[AFR][1000 genomes]
rs2710485	0.82[AFR][1000 genomes]
rs288069	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs288074	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs288078	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs288082	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs288083	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs288092	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs288093	0.85[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6435532	1.00[YRI][hapmap];0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6435534	0.83[YRI][hapmap]
rs6744370	1.00[YRI][hapmap];1.00[AMR][1000 genomes]
rs7568267	1.00[YRI][hapmap];0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs925263	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:210410600-210430800	Weak transcription	Fetal Brain Female	brain
2	chr2:210415000-210429800	Weak transcription	Pancreatic Islets	Pancreatic Islet
3	chr2:210419400-210430800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr2:210421000-210424600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
5	chr2:210421400-210430800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
6	chr2:210422600-210423800	Weak transcription	Cortex derived primary cultured neurospheres	brain
7	chr2:210422600-210425800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr2:210422800-210424400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain

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