Variant report

Variant	rs288069
Chromosome Location	chr2:210411907-210411908
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 27 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10178950	1.00[AMR][1000 genomes]
rs12694185	1.00[AMR][1000 genomes]
rs1355192	1.00[AMR][1000 genomes]
rs1355194	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1509466	1.00[AMR][1000 genomes]
rs1509473	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1858140	1.00[AMR][1000 genomes]
rs1858141	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1976583	1.00[AMR][1000 genomes]
rs2366111	1.00[AMR][1000 genomes]
rs2663657	0.82[AFR][1000 genomes]
rs2710471	1.00[AMR][1000 genomes]
rs2710481	0.82[AFR][1000 genomes]
rs2710483	0.82[AFR][1000 genomes]
rs2710484	0.82[AFR][1000 genomes]
rs2710485	0.82[AFR][1000 genomes]
rs288074	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs288078	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs288082	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs288083	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs288086	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs288092	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs288093	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6435532	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6744370	1.00[AMR][1000 genomes]
rs7568267	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs925263	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:210407400-210412200	Weak transcription	Brain Germinal Matrix	brain
2	chr2:210407400-210413000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
3	chr2:210408600-210412600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr2:210410400-210420000	Weak transcription	Fetal Brain Male	brain
5	chr2:210410600-210430800	Weak transcription	Fetal Brain Female	brain
6	chr2:210411200-210413600	Enhancers	Cortex derived primary cultured neurospheres	brain
7	chr2:210411200-210413600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
8	chr2:210411800-210413000	Genic enhancers	Ganglion Eminence derived primary cultured neurospheres	brain

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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