Variant report

Variant	rs288074
Chromosome Location	chr2:210438581-210438582
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 28 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10178950	1.00[AMR][1000 genomes]
rs12694185	1.00[AMR][1000 genomes]
rs1355192	1.00[AMR][1000 genomes]
rs1355194	1.00[YRI][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1509466	1.00[YRI][hapmap];1.00[AMR][1000 genomes]
rs1509473	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1858140	1.00[AMR][1000 genomes]
rs1858141	1.00[YRI][hapmap];0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1976583	1.00[AMR][1000 genomes]
rs2366111	0.85[YRI][hapmap];1.00[AMR][1000 genomes]
rs2663657	0.83[YRI][hapmap];0.82[AFR][1000 genomes]
rs2710471	0.85[YRI][hapmap];1.00[AMR][1000 genomes]
rs2710481	0.83[YRI][hapmap];0.82[AFR][1000 genomes]
rs2710483	0.83[YRI][hapmap];0.82[AFR][1000 genomes]
rs2710484	0.83[YRI][hapmap];0.82[AFR][1000 genomes]
rs2710485	0.82[AFR][1000 genomes]
rs288069	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs288078	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs288082	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs288083	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs288086	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs288092	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs288093	0.85[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6435532	1.00[YRI][hapmap];0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6435534	0.83[YRI][hapmap]
rs6744370	1.00[YRI][hapmap];1.00[AMR][1000 genomes]
rs7568267	1.00[YRI][hapmap];0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs925263	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:210431600-210441200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr2:210432800-210440400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
3	chr2:210434400-210441200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr2:210435200-210442200	Weak transcription	Pancreatic Islets	Pancreatic Islet
5	chr2:210437800-210441600	Weak transcription	iPS-18 Cell Line	embryonic stem cell

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