Variant report

Variant	rs2474147
Chromosome Location	chr11:32590841-32590842
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:32470229..32472520-chr11:32590568..32592522,2	K562	blood:

Extended variants
information (count: 61 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:61)

rs_ID	r²[population]
rs1038554	0.84[CHB][hapmap]
rs10734413	0.83[CHB][hapmap]
rs10767954	0.84[CHB][hapmap]
rs10767955	0.84[CHB][hapmap]
rs10767956	0.84[CHB][hapmap]
rs10767961	0.84[CHB][hapmap]
rs10835958	0.84[CHB][hapmap]
rs10835959	0.84[CHB][hapmap]
rs10835968	0.84[CHB][hapmap]
rs11031940	0.84[CHB][hapmap]
rs1486582	0.84[CHB][hapmap]
rs1543420	0.85[CHB][hapmap]
rs169323	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs169326	0.84[CHB][hapmap];0.80[EUR][1000 genomes]
rs172100	0.83[CHB][hapmap]
rs172101	0.84[CHB][hapmap]
rs183235	0.94[AMR][1000 genomes];0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs201826	0.95[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs201827	0.91[AMR][1000 genomes];0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs201829	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs201831	0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs201832	0.93[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs201837	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs201839	0.90[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];0.82[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs201840	0.82[CEU][hapmap]
rs201842	0.94[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];0.82[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs201856	0.80[EUR][1000 genomes]
rs201857	0.80[EUR][1000 genomes]
rs201869	0.84[CHB][hapmap]
rs201872	0.84[CHB][hapmap];0.81[EUR][1000 genomes]
rs201873	0.84[CHB][hapmap];0.81[EUR][1000 genomes]
rs201875	0.84[CHB][hapmap];0.82[EUR][1000 genomes]
rs201876	0.81[EUR][1000 genomes]
rs201877	0.84[CHB][hapmap];0.81[EUR][1000 genomes]
rs201878	0.81[EUR][1000 genomes]
rs201879	0.84[CHB][hapmap];0.81[EUR][1000 genomes]
rs201881	0.84[CHB][hapmap]
rs201886	0.89[AMR][1000 genomes];0.82[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs201887	0.81[CHB][hapmap]
rs201897	0.83[CEU][hapmap];0.84[CHB][hapmap]
rs201901	0.84[CHB][hapmap]
rs201903	0.84[CHB][hapmap]
rs201905	0.84[CHB][hapmap]
rs201906	0.83[CEU][hapmap];0.84[CHB][hapmap]
rs2467583	0.87[AMR][1000 genomes];0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2748353	0.84[CHB][hapmap]
rs4756150	0.84[CHB][hapmap]
rs4756183	0.84[CHB][hapmap]
rs506814	0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs511667	0.84[CHB][hapmap]
rs527728	0.84[CHB][hapmap]
rs567062	0.86[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6484587	0.84[CHB][hapmap]
rs7105305	0.84[CHB][hapmap]
rs7129723	0.84[CHB][hapmap]
rs7933967	0.83[CEU][hapmap];0.84[CHB][hapmap]
rs7944621	0.81[CEU][hapmap]
rs910551	0.84[CHB][hapmap]
rs966028	0.84[CHB][hapmap]
rs9787914	0.84[CHB][hapmap]
rs9943472	0.84[CHB][hapmap]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:32588800-32592200	Weak transcription	Dnd41	blood

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links