Variant report

Variant	rs183235
Chromosome Location	chr11:32592714-32592715
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 83 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:83)

rs_ID	r²[population]
rs1038554	0.96[CEU][hapmap];0.88[EUR][1000 genomes]
rs10734413	0.96[CEU][hapmap];0.86[EUR][1000 genomes]
rs10742286	0.84[EUR][1000 genomes]
rs10767954	0.96[CEU][hapmap];0.87[EUR][1000 genomes]
rs10767955	0.96[CEU][hapmap]
rs10767956	0.96[CEU][hapmap];0.86[EUR][1000 genomes]
rs10767961	0.96[CEU][hapmap]
rs10835956	0.87[EUR][1000 genomes]
rs10835958	0.96[CEU][hapmap];0.85[EUR][1000 genomes]
rs10835959	0.96[CEU][hapmap];0.85[EUR][1000 genomes]
rs10835966	0.83[EUR][1000 genomes]
rs10835968	0.96[CEU][hapmap]
rs11031938	0.88[EUR][1000 genomes]
rs11031940	0.96[CEU][hapmap];0.88[EUR][1000 genomes]
rs11031963	0.84[EUR][1000 genomes]
rs12293058	0.87[EUR][1000 genomes]
rs1324397	0.89[EUR][1000 genomes]
rs1486582	0.96[CEU][hapmap];0.87[EUR][1000 genomes]
rs1543420	0.96[CEU][hapmap]
rs169323	1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs169326	0.96[CEU][hapmap];0.81[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs172100	0.96[CEU][hapmap]
rs172101	0.96[CEU][hapmap]
rs201826	1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs201827	0.88[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs201829	0.96[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs201831	0.94[AMR][1000 genomes];0.80[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs201832	0.96[AMR][1000 genomes];0.81[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs201837	0.91[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs201839	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs201842	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs201847	0.88[EUR][1000 genomes]
rs201848	0.87[EUR][1000 genomes]
rs201856	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs201857	0.96[EUR][1000 genomes]
rs201858	0.81[EUR][1000 genomes]
rs201860	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs201869	0.96[CEU][hapmap]
rs201872	0.96[CEU][hapmap];0.85[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs201873	0.96[CEU][hapmap];0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs201875	0.89[CEU][hapmap];0.81[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs201876	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs201877	0.96[CEU][hapmap];0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs201878	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs201879	0.96[CEU][hapmap];0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs201883	0.80[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs201886	0.93[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs201887	0.90[CHB][hapmap]
rs201901	0.96[CEU][hapmap];0.94[EUR][1000 genomes]
rs201902	0.94[EUR][1000 genomes]
rs201903	0.96[CEU][hapmap];0.92[EUR][1000 genomes]
rs201905	0.96[CEU][hapmap];0.93[EUR][1000 genomes]
rs2036795	0.88[EUR][1000 genomes]
rs2129307	0.87[EUR][1000 genomes]
rs2171242	0.87[EUR][1000 genomes]
rs2419403	0.87[EUR][1000 genomes]
rs2467583	0.84[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs2474147	0.94[AMR][1000 genomes];0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2748353	0.96[CEU][hapmap];0.88[EUR][1000 genomes]
rs400655	0.88[EUR][1000 genomes]
rs401257	0.88[EUR][1000 genomes]
rs4551733	0.86[EUR][1000 genomes]
rs4756150	0.96[CEU][hapmap]
rs4756183	0.96[CEU][hapmap]
rs506814	0.94[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs511667	0.92[CEU][hapmap];0.90[EUR][1000 genomes]
rs527728	0.96[CEU][hapmap]
rs567062	0.96[AMR][1000 genomes];0.82[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6484587	1.00[CEU][hapmap]
rs7104435	0.86[EUR][1000 genomes]
rs7105305	0.96[CEU][hapmap];0.88[EUR][1000 genomes]
rs7118792	0.88[EUR][1000 genomes]
rs7129723	0.96[CEU][hapmap];0.88[EUR][1000 genomes]
rs738508	0.96[CEU][hapmap]
rs7932758	0.87[EUR][1000 genomes]
rs7938914	0.84[EUR][1000 genomes]
rs7942796	0.87[EUR][1000 genomes]
rs7944621	0.83[CEU][hapmap]
rs7947996	0.88[EUR][1000 genomes]
rs910551	0.96[CEU][hapmap]
rs966028	0.96[CEU][hapmap];0.87[EUR][1000 genomes]
rs9787914	0.92[CEU][hapmap];0.87[EUR][1000 genomes]
rs9943472	0.96[CEU][hapmap];0.84[EUR][1000 genomes]

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:32592200-32592800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr11:32592200-32592800	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell
3	chr11:32592200-32592800	Bivalent Enhancer	iPS-20b Cell Line	embryonic stem cell
4	chr11:32592200-32595000	Enhancers	Dnd41	blood
5	chr11:32592400-32592800	Bivalent Enhancer	iPS-18 Cell Line	embryonic stem cell
6	chr11:32592400-32592800	Bivalent Enhancer	K562	blood
7	chr11:32592400-32593000	Bivalent Enhancer	HUES48 Cell Line	embryonic stem cell
8	chr11:32592400-32593400	Enhancers	ES-I3 Cell Line	embryonic stem cell
9	chr11:32592400-32593400	Enhancers	H1 Cell Line	embryonic stem cell
10	chr11:32592400-32593400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
11	chr11:32592600-32592800	Bivalent Enhancer	ES-WA7 Cell Line	embryonic stem cell
12	chr11:32592600-32592800	Bivalent Enhancer	IMR90 fetal lung fibroblasts Cell Line	lung
13	chr11:32592600-32593200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
14	chr11:32592600-32593400	Enhancers	HUES6 Cell Line	embryonic stem cell
15	chr11:32592600-32593400	Enhancers	HUES64 Cell Line	embryonic stem cell
16	chr11:32592600-32593400	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
17	chr11:32592600-32593400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
18	chr11:32592600-32594200	Enhancers	Fetal Thymus	thymus

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