Variant report

Variant	rs2531691
Chromosome Location	chr10:118639142-118639143
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:118637537..118640975-chr10:118647484..118651676,4	K562	blood:
2	chr10:118636634..118640505-chr10:118641692..118646395,4	K562	blood:
3	chr10:118637996..118640960-chr10:118646617..118648984,2	K562	blood:
4	chr10:118638561..118640505-chr10:118642670..118645374,2	K562	blood:

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10787733	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10787734	0.88[YRI][hapmap];0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10886018	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1905537	0.94[YRI][hapmap];0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2083023	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2429364	1.00[ASW][hapmap];0.95[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2449807	1.00[ASW][hapmap];1.00[LWK][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2627192	0.82[YRI][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2627193	0.88[YRI][hapmap];0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs3981233	1.00[ASW][hapmap];0.95[LWK][hapmap];1.00[MEX][hapmap];0.94[MKK][hapmap];0.94[YRI][hapmap];0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4103264	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4752019	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4752022	1.00[ASW][hapmap];0.95[LWK][hapmap];1.00[MEX][hapmap];0.89[MKK][hapmap];0.94[YRI][hapmap]
rs7091456	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7093852	0.93[AFR][1000 genomes]
rs7903166	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7904342	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7919600	0.88[YRI][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:29 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:118634600-118639200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr10:118636600-118647800	Weak transcription	Liver	Liver
3	chr10:118637200-118648400	Weak transcription	Brain Substantia Nigra	brain
4	chr10:118637200-118658800	Weak transcription	Pancreas	Pancrea
5	chr10:118637400-118640000	Weak transcription	HSMMtube	muscle
6	chr10:118637600-118641400	Weak transcription	Fetal Brain Female	brain
7	chr10:118637600-118670400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
8	chr10:118637800-118643000	Weak transcription	Primary monocytes fromperipheralblood	blood
9	chr10:118637800-118645000	Weak transcription	Brain Inferior Temporal Lobe	brain
10	chr10:118637800-118648400	Weak transcription	Brain Angular Gyrus	brain
11	chr10:118638000-118643000	Weak transcription	Brain Anterior Caudate	brain
12	chr10:118638000-118645000	Weak transcription	Brain Hippocampus Middle	brain
13	chr10:118638400-118643600	Weak transcription	HUVEC	blood vessel
14	chr10:118638600-118640400	Enhancers	HUES6 Cell Line	embryonic stem cell
15	chr10:118638600-118640400	Weak transcription	Monocytes-CD14+_RO01746	blood
16	chr10:118638600-118640600	Enhancers	HUES64 Cell Line	embryonic stem cell
17	chr10:118638600-118640600	Enhancers	iPS-18 Cell Line	embryonic stem cell
18	chr10:118638600-118648400	Weak transcription	Fetal Intestine Large	intestine
19	chr10:118638800-118639600	Enhancers	H9 Cell Line	embryonic stem cell
20	chr10:118638800-118639800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
21	chr10:118638800-118640000	Enhancers	iPS-15b Cell Line	embryonic stem cell
22	chr10:118638800-118640200	Enhancers	iPS-20b Cell Line	embryonic stem cell
23	chr10:118638800-118640400	Enhancers	HUES48 Cell Line	embryonic stem cell
24	chr10:118638800-118640600	Enhancers	ES-I3 Cell Line	embryonic stem cell
25	chr10:118639000-118639400	Enhancers	Brain Germinal Matrix	brain
26	chr10:118639000-118639600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
27	chr10:118639000-118639800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
28	chr10:118639000-118640800	Enhancers	Brain Cingulate Gyrus	brain
29	chr10:118639000-118666600	Weak transcription	Fetal Intestine Small	intestine

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