Variant report

Variant rs2596658
Chromosome Location chr3:17245725-17245726
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:17221600-17295800 Weak transcription HSMM muscle
2 chr3:17225600-17256000 Weak transcription HepG2 liver
3 chr3:17225800-17254800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr3:17236200-17254600 Weak transcription A549 lung
5 chr3:17237200-17246800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr3:17237200-17253800 Weak transcription HSMMtube muscle
7 chr3:17237600-17245800 Weak transcription Pancreatic Islets Pancreatic Islet
8 chr3:17237800-17248400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr3:17237800-17254800 Weak transcription Muscle Satellite Cultured Cells --
10 chr3:17238000-17256800 Weak transcription Psoas Muscle Psoas
11 chr3:17242600-17256400 Weak transcription Stomach Mucosa stomach
12 chr3:17242800-17246000 ZNF genes & repeats GM12878-XiMat blood
13 chr3:17243000-17245800 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
14 chr3:17243000-17245800 ZNF genes & repeats Primary B cells from peripheral blood blood
15 chr3:17243000-17246000 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
16 chr3:17243200-17245800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr3:17243200-17246000 ZNF genes & repeats Primary monocytes fromperipheralblood blood
18 chr3:17243200-17246000 ZNF genes & repeats Primary T cells fromperipheralblood blood
19 chr3:17243400-17246000 ZNF genes & repeats Primary hematopoietic stem cells blood
20 chr3:17243400-17246200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr3:17243800-17246200 ZNF genes & repeats Fetal Intestine Small intestine
22 chr3:17244000-17246000 ZNF genes & repeats Dnd41 blood
23 chr3:17244200-17248400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr3:17244200-17261200 Weak transcription Colon Smooth Muscle Colon
25 chr3:17244200-17280600 Weak transcription Rectal Smooth Muscle rectum
26 chr3:17244400-17246000 Weak transcription Placenta Amnion Placenta Amnion
27 chr3:17244400-17246200 Strong transcription Monocytes-CD14+_RO01746 blood
28 chr3:17244400-17247200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr3:17244400-17254000 Weak transcription Fetal Adrenal Gland Adrenal Gland
30 chr3:17244400-17256800 Weak transcription Rectal Mucosa Donor 31 rectum
31 chr3:17244400-17261800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr3:17244400-17271800 Weak transcription Spleen Spleen
33 chr3:17244600-17245800 Strong transcription Lung lung
34 chr3:17244600-17246600 Weak transcription Colonic Mucosa Colon
35 chr3:17244600-17247000 Weak transcription Left Ventricle heart
36 chr3:17244600-17247600 Strong transcription Adipose Nuclei Adipose
37 chr3:17244600-17248000 Weak transcription Primary T cells from cord blood blood
38 chr3:17244600-17248000 Weak transcription Aorta Aorta
39 chr3:17244600-17248400 Strong transcription Primary B cells from cord blood blood
40 chr3:17244600-17249400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr3:17244600-17250200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr3:17244600-17253800 Weak transcription Liver Liver
43 chr3:17244600-17254200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
44 chr3:17244600-17254400 Weak transcription Duodenum Smooth Muscle Duodenum
45 chr3:17244600-17254400 Weak transcription Rectal Mucosa Donor 29 rectum
46 chr3:17244600-17255000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
47 chr3:17244600-17255000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
48 chr3:17244600-17255000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
49 chr3:17244600-17255200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
50 chr3:17244600-17256200 Weak transcription Sigmoid Colon Sigmoid Colon

Quick Search:


  
Input of quick search could be:

what's new

Quick links