Variant report
| Variant | rs2596682 |
|---|---|
| Chromosome Location | chr3:17221849-17221850 |
| allele | A/C |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:17195000-17224200 | Weak transcription | Fetal Kidney | kidney |
| 2 | chr3:17195200-17223000 | Weak transcription | Fetal Brain Female | brain |
| 3 | chr3:17198400-17225200 | Weak transcription | HMEC | breast |
| 4 | chr3:17200800-17225600 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 5 | chr3:17201200-17236200 | Weak transcription | Fetal Brain Male | brain |
| 6 | chr3:17203200-17224400 | Weak transcription | A549 | lung |
| 7 | chr3:17203800-17244200 | Weak transcription | Colonic Mucosa | Colon |
| 8 | chr3:17208000-17223600 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 9 | chr3:17208200-17244000 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 10 | chr3:17208400-17223600 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 11 | chr3:17208400-17224400 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 12 | chr3:17208400-17228600 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 13 | chr3:17208400-17243800 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
| 14 | chr3:17208400-17244000 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 15 | chr3:17208600-17224600 | Weak transcription | HepG2 | liver |
| 16 | chr3:17208800-17234400 | Weak transcription | Brain Angular Gyrus | brain |
| 17 | chr3:17209000-17234000 | Weak transcription | Brain Substantia Nigra | brain |
| 18 | chr3:17209200-17224400 | Weak transcription | Placenta | Placenta |
| 19 | chr3:17209200-17224800 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 20 | chr3:17209200-17225000 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 21 | chr3:17209200-17225600 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
| 22 | chr3:17209400-17224600 | Weak transcription | Fetal Lung | lung |
| 23 | chr3:17209600-17223000 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 24 | chr3:17209600-17224400 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
| 25 | chr3:17209600-17224400 | Weak transcription | Liver | Liver |
| 26 | chr3:17209600-17224400 | Weak transcription | Lung | lung |
| 27 | chr3:17209600-17224600 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 28 | chr3:17209600-17224600 | Weak transcription | Fetal Muscle Leg | muscle |
| 29 | chr3:17209600-17234000 | Weak transcription | Brain Hippocampus Middle | brain |
| 30 | chr3:17209600-17236800 | Weak transcription | Gastric | stomach |
| 31 | chr3:17210000-17224400 | Weak transcription | Fetal Intestine Large | intestine |
| 32 | chr3:17210000-17244000 | Weak transcription | Esophagus | oesophagus |
| 33 | chr3:17210400-17224600 | Weak transcription | Fetal Muscle Trunk | muscle |
| 34 | chr3:17210800-17222200 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 35 | chr3:17212200-17224600 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 36 | chr3:17215600-17236800 | Weak transcription | Pancreas | Pancrea |
| 37 | chr3:17217600-17224400 | Weak transcription | Fetal Stomach | stomach |
| 38 | chr3:17217600-17224400 | Weak transcription | Stomach Smooth Muscle | stomach |
| 39 | chr3:17217600-17225200 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 40 | chr3:17217600-17225200 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 41 | chr3:17217600-17225600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 42 | chr3:17217600-17242600 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 43 | chr3:17217800-17222600 | Weak transcription | Adipose Nuclei | Adipose |
| 44 | chr3:17217800-17224400 | Weak transcription | NHEK | skin |
| 45 | chr3:17217800-17224800 | Weak transcription | Duodenum Mucosa | Duodenum |
| 46 | chr3:17217800-17224800 | Weak transcription | Rectal Smooth Muscle | rectum |
| 47 | chr3:17217800-17225000 | Weak transcription | Ovary | ovary |
| 48 | chr3:17217800-17225200 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 49 | chr3:17217800-17232000 | Weak transcription | Spleen | Spleen |
| 50 | chr3:17217800-17234200 | Weak transcription | H1 Cell Line | embryonic stem cell |
