Variant report

Variant	rs2722720
Chromosome Location	chr19:44822886-44822887
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 45 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:45)

rs_ID	r²[population]
rs1233428	0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1233441	0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1233444	0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1233447	0.82[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1233448	0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1233459	0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1233466	0.82[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1233467	0.82[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1233468	0.82[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1233470	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12974099	0.96[ASN][1000 genomes]
rs1434574	0.93[ASN][1000 genomes]
rs1582	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1808735	0.94[ASN][1000 genomes]
rs1821458	0.94[ASN][1000 genomes]
rs1821459	0.94[ASN][1000 genomes]
rs2571062	0.92[ASN][1000 genomes]
rs2571099	0.92[ASN][1000 genomes]
rs2571101	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2571102	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2571104	0.94[ASN][1000 genomes]
rs2609874	0.84[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2609875	0.84[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2609877	0.84[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2609880	0.94[ASN][1000 genomes]
rs2609894	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2609895	0.96[ASN][1000 genomes]
rs2609896	0.96[ASN][1000 genomes]
rs2609897	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2609908	0.84[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2722714	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2722722	0.94[ASN][1000 genomes]
rs2722723	0.94[ASN][1000 genomes]
rs2722725	0.94[ASN][1000 genomes]
rs2722726	0.80[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2722727	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2722731	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2722737	0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2722751	0.84[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4280359	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4325673	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4640292	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4802216	0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7249559	0.96[ASN][1000 genomes]
rs892595	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs2722720	ZNF233	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:44814600-44824600	Weak transcription	Skeletal Muscle Female	skeletal muscle

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