Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:99224377..99226344-chr7:99414554..99417105,2	K562	blood:
2	chr7:99414195..99416964-chr7:99417177..99419038,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000261511	Chromatin interaction

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs1036374	0.91[EUR][1000 genomes]
rs12535293	1.00[GIH][hapmap]
rs12535919	1.00[GIH][hapmap]
rs17161937	1.00[CEU][hapmap];1.00[GIH][hapmap];0.91[EUR][1000 genomes]
rs17161971	1.00[GIH][hapmap]
rs17161974	1.00[GIH][hapmap]
rs17161981	1.00[GIH][hapmap]
rs17161983	1.00[GIH][hapmap]
rs1851426	0.86[ASW][hapmap];1.00[CEU][hapmap];0.82[MEX][hapmap];1.00[TSI][hapmap];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2023548	1.00[CEU][hapmap];1.00[GIH][hapmap];0.91[EUR][1000 genomes]
rs2103030	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2461610	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2687105	1.00[CEU][hapmap];0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs2687116	0.96[EUR][1000 genomes]
rs2738262	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2740574	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28988583	0.86[EUR][1000 genomes]
rs4281055	0.96[EUR][1000 genomes]
rs585071	0.93[ASW][hapmap];0.91[YRI][hapmap]
rs620020	1.00[YRI][hapmap];0.92[AFR][1000 genomes]
rs642761	0.93[ASW][hapmap];0.84[MKK][hapmap];0.96[YRI][hapmap];0.81[AFR][1000 genomes]
rs667660	0.93[ASW][hapmap];0.85[LWK][hapmap];0.91[MKK][hapmap];0.87[YRI][hapmap];0.89[AFR][1000 genomes]
rs73393660	0.91[EUR][1000 genomes]
rs892753	0.91[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1827709	chr7:99353500-99440051	Weak transcription Enhancers Flanking Active TSS Genic enhancers Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
2	nsv970418	chr7:99413271-99420442	Enhancers Flanking Active TSS Active TSS Weak transcription Bivalent Enhancer	TF binding region Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:99415200-99415600	Enhancers	HepG2	liver
2	chr7:99415200-99415600	Enhancers	HMEC	breast
3	chr7:99415400-99416200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr7:99415400-99416600	Enhancers	Adipose Nuclei	Adipose

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