The 2.0 version of rSNPBase

Variant report

Variant rs28683114
Chromosome Location chr18:45411568-45411569
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:45382200-45420400 Weak transcription Right Ventricle heart
2 chr18:45384200-45421200 Weak transcription Gastric stomach
3 chr18:45384200-45423000 Weak transcription Lung lung
4 chr18:45384400-45419600 Weak transcription K562 blood
5 chr18:45384400-45423000 Weak transcription Spleen Spleen
6 chr18:45384800-45418400 Weak transcription Fetal Brain Male brain
7 chr18:45385600-45420800 Weak transcription Brain Germinal Matrix brain
8 chr18:45386800-45420400 Weak transcription H9 Cell Line embryonic stem cell
9 chr18:45386800-45420600 Weak transcription Esophagus oesophagus
10 chr18:45390000-45413600 Weak transcription Fetal Heart heart
11 chr18:45390600-45419600 Weak transcription Placenta Amnion Placenta Amnion
12 chr18:45391000-45418400 Weak transcription HUVEC blood vessel
13 chr18:45391200-45416400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
14 chr18:45394600-45414000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
15 chr18:45395400-45420800 Weak transcription Fetal Brain Female brain
16 chr18:45396000-45418800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
17 chr18:45396200-45413400 Weak transcription Primary B cells from peripheral blood blood
18 chr18:45397000-45430600 Weak transcription Brain Angular Gyrus brain
19 chr18:45398200-45420400 Weak transcription Stomach Smooth Muscle stomach
20 chr18:45398400-45414400 Weak transcription Primary T killer memory cells from peripheral blood blood
21 chr18:45399200-45413400 Weak transcription Sigmoid Colon Sigmoid Colon
22 chr18:45399200-45420600 Weak transcription Pancreas Pancrea
23 chr18:45399600-45411600 Weak transcription Fetal Intestine Small intestine
24 chr18:45399600-45413600 Weak transcription Fetal Muscle Trunk muscle
25 chr18:45399600-45419000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
26 chr18:45400400-45432200 Weak transcription Ovary ovary
27 chr18:45400600-45424600 Weak transcription Stomach Mucosa stomach
28 chr18:45401200-45426000 Weak transcription Brain Cingulate Gyrus brain
29 chr18:45401400-45420600 Weak transcription Brain Anterior Caudate brain
30 chr18:45401400-45424600 Weak transcription Brain Hippocampus Middle brain
31 chr18:45401600-45421400 Weak transcription iPS-15b Cell Line embryonic stem cell
32 chr18:45401600-45423400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr18:45403800-45422200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
34 chr18:45404800-45417800 Strong transcription Primary hematopoietic stem cells short term culture blood
35 chr18:45404800-45418000 Strong transcription Primary monocytes fromperipheralblood blood
36 chr18:45405200-45423400 Strong transcription Monocytes-CD14+_RO01746 blood
37 chr18:45406800-45414000 Strong transcription Fetal Thymus thymus
38 chr18:45407400-45420600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr18:45407600-45413400 Weak transcription Rectal Mucosa Donor 31 rectum
40 chr18:45407600-45421000 Weak transcription ES-I3 Cell Line embryonic stem cell
41 chr18:45407800-45412600 Weak transcription Primary hematopoietic stem cells blood
42 chr18:45407800-45420000 Weak transcription Duodenum Smooth Muscle Duodenum
43 chr18:45408200-45411600 Weak transcription Primary T helper cells fromperipheralblood blood
44 chr18:45408400-45414000 Weak transcription Cortex derived primary cultured neurospheres brain
45 chr18:45408400-45415400 Weak transcription Fetal Lung lung
46 chr18:45408600-45411600 Weak transcription Fetal Adrenal Gland Adrenal Gland
47 chr18:45408800-45412000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr18:45408800-45413000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr18:45408800-45413400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
50 chr18:45408800-45420400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell

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Last update: Aug 31, 2015