Variant report
| Variant | rs28801990 |
|---|---|
| Chromosome Location | chr1:212023856-212023857 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:32)
| rs_ID | r2[population] |
|---|---|
| rs10863927 | 0.87[EUR][1000 genomes] |
| rs11119818 | 0.87[EUR][1000 genomes] |
| rs11119819 | 0.87[EUR][1000 genomes] |
| rs1418047 | 0.82[EUR][1000 genomes] |
| rs1539196 | 0.82[EUR][1000 genomes] |
| rs2000168 | 0.87[EUR][1000 genomes] |
| rs2050953 | 0.82[EUR][1000 genomes] |
| rs2105322 | 0.87[EUR][1000 genomes] |
| rs28475044 | 0.87[EUR][1000 genomes] |
| rs28851183 | 0.87[EUR][1000 genomes] |
| rs4508084 | 0.87[EUR][1000 genomes] |
| rs4579825 | 0.87[EUR][1000 genomes] |
| rs4951424 | 0.82[EUR][1000 genomes] |
| rs4951427 | 0.82[EUR][1000 genomes] |
| rs4951429 | 0.87[EUR][1000 genomes] |
| rs4951430 | 0.87[EUR][1000 genomes] |
| rs4951432 | 0.87[EUR][1000 genomes] |
| rs4951547 | 0.82[EUR][1000 genomes] |
| rs4951549 | 0.82[EUR][1000 genomes] |
| rs60146950 | 0.82[EUR][1000 genomes] |
| rs6540710 | 0.87[EUR][1000 genomes] |
| rs6669803 | 0.82[EUR][1000 genomes] |
| rs6672393 | 0.82[EUR][1000 genomes] |
| rs6685282 | 0.87[EUR][1000 genomes] |
| rs6689342 | 0.87[EUR][1000 genomes] |
| rs6693275 | 0.82[EUR][1000 genomes] |
| rs6697341 | 0.87[EUR][1000 genomes] |
| rs6699292 | 0.82[EUR][1000 genomes] |
| rs6699981 | 0.87[EUR][1000 genomes] |
| rs7413558 | 0.87[EUR][1000 genomes] |
| rs7517565 | 0.87[EUR][1000 genomes] |
| rs7545377 | 0.87[EUR][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:212016800-212027000 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
