The 2.0 version of rSNPBase

Variant report

Variant rs7545377
Chromosome Location chr1:211992693-211992694
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:211916800-211994200 Weak transcription Fetal Brain Male brain
2 chr1:211919200-212001200 Weak transcription Gastric stomach
3 chr1:211924000-212002400 Weak transcription NHLF lung
4 chr1:211938200-211999400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
5 chr1:211939800-212002400 Weak transcription HSMMtube muscle
6 chr1:211940000-212000600 Weak transcription Rectal Smooth Muscle rectum
7 chr1:211947400-212002400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
8 chr1:211952200-212003000 Weak transcription Placenta Amnion Placenta Amnion
9 chr1:211957600-211998800 Weak transcription NHDF-Ad bronchial
10 chr1:211957600-212000800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
11 chr1:211961200-212002200 Weak transcription Primary T helper cells PMA-I stimulated --
12 chr1:211965800-212002200 Weak transcription Primary T cells from cord blood blood
13 chr1:211966400-211997400 Weak transcription Sigmoid Colon Sigmoid Colon
14 chr1:211966400-212002400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr1:211966600-211997400 Weak transcription Spleen Spleen
16 chr1:211967000-211998800 Weak transcription Osteobl bone
17 chr1:211971800-212002400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
18 chr1:211974000-212001200 Weak transcription Small Intestine intestine
19 chr1:211976800-211997000 Weak transcription Fetal Kidney kidney
20 chr1:211979400-212000600 Weak transcription Aorta Aorta
21 chr1:211981200-211997200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr1:211983000-212002400 Weak transcription HUES6 Cell Line embryonic stem cell
23 chr1:211983200-212002400 Weak transcription Thymus Thymus
24 chr1:211984600-212002400 Weak transcription NH-A brain
25 chr1:211984800-212002000 Weak transcription HUVEC blood vessel
26 chr1:211984800-212002400 Weak transcription Primary T helper naive cells fromperipheralblood blood
27 chr1:211986200-212000600 Weak transcription HepG2 liver
28 chr1:211986200-212000800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
29 chr1:211986200-212001000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
30 chr1:211986200-212001000 Weak transcription Primary T helper cells fromperipheralblood blood
31 chr1:211986200-212001000 Weak transcription Skeletal Muscle Male skeletal muscle
32 chr1:211986200-212002400 Weak transcription Rectal Mucosa Donor 29 rectum
33 chr1:211986200-212002800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr1:211986400-211992800 Weak transcription Fetal Muscle Trunk muscle
35 chr1:211986400-211993200 Weak transcription GM12878-XiMat blood
36 chr1:211986400-212001400 Weak transcription Primary T regulatory cells fromperipheralblood blood
37 chr1:211986800-212001000 Weak transcription Hela-S3 cervix
38 chr1:211987200-212002400 Weak transcription HMEC breast
39 chr1:211987400-211993400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr1:211987400-212000600 Weak transcription Skeletal Muscle Female skeletal muscle
41 chr1:211987600-212000200 Weak transcription Pancreatic Islets Pancreatic Islet
42 chr1:211987800-211999200 Weak transcription NHEK skin
43 chr1:211987800-212001000 Weak transcription Psoas Muscle Psoas
44 chr1:211988000-212000600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
45 chr1:211988000-212000800 Weak transcription Colon Smooth Muscle Colon
46 chr1:211988200-212002400 Weak transcription Cortex derived primary cultured neurospheres brain
47 chr1:211988400-211993000 Weak transcription Fetal Lung lung
48 chr1:211988400-211994600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
49 chr1:211988400-211996800 Weak transcription Brain Germinal Matrix brain
50 chr1:211988400-212002000 Weak transcription Duodenum Smooth Muscle Duodenum

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Last update: Aug 31, 2015